Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01323 ATGGGTGCGAGAATAGCCTTTTTAGTAATTGTGTGTGTTCTTCCAACGATGGTCTCAGCCATACGGCCTCACCTGACCCCTTTCTATGTGAAGGGTCGCGTGTATTGTGACCCTTGCCGTGCTGGTTTTGAGACCCCCCTCACCACCTACATTGCTGGTGCCGAGGTTACTCTGCAATGCAAGGACAGAATCACAAACAACATTGTGTACAGCAAGCAGGCTAAGACAGATTCCTCAGGATCATTTACGATCTTCGTGGACGCGAATCAAGCGAATCAAAATTGTGATGCGAGTCTTGTAACCAGTCCTATGGGTGATTGCAAAGAACCCACACCAGGTCGTGACCACACACGTGTTGTTCTCAATCGCTTCAATGGCATTGCCACCAATGATAGATTCGTCAACAACTTGGGTTTCATGAAGGAAAAGGTTGCTTCTGGTTGTGCAAGGATTTTCAGGCGTTACCGAGAGTCCGACAATGGGAATTGA 489 0.4785 MGARIAFLVIVCVLPTMVSAIRPHLTPFYVKGRVYCDPCRAGFETPLTTYIAGAEVTLQCKDRITNNIVYSKQAKTDSSGSFTIFVDANQANQNCDASLVTSPMGDCKEPTPGRDHTRVVLNRFNGIATNDRFVNNLGFMKEKVASGCARIFRRYRESDNGN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01323 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 9 156 IPR006041 -
Pumo9g01323 162 Pfam Pollen protein Ole e 1 like 30 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01323 Pumo-Chr9 38854751 38856082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01323 - - gmx:100796594 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01323 9 38854751 38856082 Pumo9g01323 9 38854751 38856082 ECH
Pumo9g01323 9 38854751 38856082 Pumo10g01162 10 15042207 15044411 PCT