Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01162 ATGGCCTCGAGAGCAGTGTTATTGTTGGCTATGTGTGTGCTTCCGGCGATGGTTGTGGCCATTCGCCCAGCAAAGAACCCTTTTTGCGTGAAGGGTCGTGTCTACTGTGACCCTTGCCGTGCTGGTTTTGAGACCCCAGCAACCACCTACATTGCTGGTGCTGAGGTTATGTTGCAATGCAAGAGCAGGGTTAGCAACGAGGTTGTGTACACCAAGAGGGGGTATACTGACTCAACTGGAGCGTACACACTGTACGTGGATGAGGATCACGCAGATGAGCTTTGCAGTGCCAAGCTTGTAAGCAGCCCTCACCCTCAATGTAAGGAAGCCACCCCAGGCCGCGAAGAAGCCGTTGTTATTCTCACCCGCTACAACGGCATTGCCTCCGATGACAGGTTCGCCAATGCCATGGGCTTCATGTCTCAGGAGGTTGCTTCTGGCTGTGCTGAGATCCTCAGGCAATACCAGGAGTTCGACAATGAAAATTAA 489 0.5276 MASRAVLLLAMCVLPAMVVAIRPAKNPFCVKGRVYCDPCRAGFETPATTYIAGAEVMLQCKSRVSNEVVYTKRGYTDSTGAYTLYVDEDHADELCSAKLVSSPHPQCKEATPGREEAVVILTRYNGIASDDRFANAMGFMSQEVASGCAEILRQYQEFDNEN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01162 162 Pfam Pollen protein Ole e 1 like 30 111 - -
Pumo10g01162 162 PANTHER PROTEIN DOWNSTREAM OF FLC-RELATED 3 157 IPR006041 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01162 Pumo-Chr10 15042207 15044411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01162 - - gmx:100305566 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01162 10 15042207 15044411 Pumo10g01162 10 15042207 15044411 ECH
Pumo9g01323 9 38854751 38856082 Pumo10g01162 10 15042207 15044411 PCT