Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01165 ATGATTGAAAACGGTGGCACACAGACATTTAATGTCTCCAATGACACGCTTCAACAAGTAGGTTCCAAGAGCTTTGATGATGATGGCCGTCCCAAAAGAACAGGAACTATTTGTACTGCAAGTGCCCACATAATAACAGCTGTTATTGGTTCTGGGGTGCTATCTTTGGCTTGGGCTATTGCTCAGCTTGGTTGGGTTGCTGGTCCTGCTACGATGTTTCTCTTCTCTATTGTGACTTATTACACCTCAACTCTTCTAGCTGCTTGTTACCGTTCTGGTGACCAACTCACTGGCAAGAGAAACTACACTTACACACAAGCTGTTAGATCCAACCTTGGCGGTGCTTCGGTCAAGTTTTGTGGGTGGGTTCAGTATGCAAACCTTTTTGGAGTGGCAATTGGGTACACCATAGCAGCTTCCATAAGCATGATGGCAATCAAAAGGTCTAATTGTTATCATTTTAGCGGAGGAAAAGATCCATGCAAAATGAACAGCAATTGGTACATGATTTCATTTGGTGTTGCGGAAATTATTTTCTCCCAAATTCCAGATTTCCATGAGCTATGGTGGCTCTCTATTGTAGCTGCTGTCATGTCCTTCACATACTCATTCATTGGACTTGGCCTTGGTGTTGGTAAAGTTATAGGAAACGGAACAGTTAAAGGAAGCCTAACTGGTGTAACTATTGGGTCTGTGACACAAGCCCAAAAAACTTGGAGGAGCTTCCAAGCTCTTGGTAACATAGCCTTTGCCTACTCCTACTCAATGATCCTTATTGAAATTCAGGACACAGTGAAATCCCCTCCAGCAGAGTCAAAGACAATGTCCAAGGCTACTTTAGTCAGTGTTTTAGTCACAACCGTTTTCTATATGCTATGTGGTTGCTTTGGCTATGCTGCTTTTGGAGATGACAGCCCTGGAAACCTTCTCACTGGCTTTGGCTTCTATAACCCTTATTGGCTCATCGACATAGCCAATGTTGCCATTGTTGTCCACCTTGTTGGTGCATACCAAGTTTACTGCCAACCCCTCTTCGCATTTGTTGAACAAAATGCAGCAGAAAGATTCCCAAATAATGATTTTATGACCAAAGAGTTTGAAGTACCAATCCCTGGTTGCCAGCCCTACAGGCTCAACCTCTTCAGGTTGGTTTGGAGGACAATTTTTGTGATAGTATCAACTGTGATAGCCATGCTCCTACCATTCTTCAATGACATTGTAGGGCTTATTGGAGCCATTGGATTTTGGCCCCTCACTGTGTATTTACCAGTGGAGATGTATATAAAACAAACAAAGATACCAAAGTGGAGCATAAAATGGATATGCCTACAAATGCTTAGTGGTGCATGCCTTGTAATTACTCTAGTAGCTGCAGTAGGTTCCATTGCTGGGGTTGTTGGTGATCTTAAAGTTTACAAGCCATTCGTTACCAGTTACTAA 1440 0.4285 MIENGGTQTFNVSNDTLQQVGSKSFDDDGRPKRTGTICTASAHIITAVIGSGVLSLAWAIAQLGWVAGPATMFLFSIVTYYTSTLLAACYRSGDQLTGKRNYTYTQAVRSNLGGASVKFCGWVQYANLFGVAIGYTIAASISMMAIKRSNCYHFSGGKDPCKMNSNWYMISFGVAEIIFSQIPDFHELWWLSIVAAVMSFTYSFIGLGLGVGKVIGNGTVKGSLTGVTIGSVTQAQKTWRSFQALGNIAFAYSYSMILIEIQDTVKSPPAESKTMSKATLVSVLVTTVFYMLCGCFGYAAFGDDSPGNLLTGFGFYNPYWLIDIANVAIVVHLVGAYQVYCQPLFAFVEQNAAERFPNNDFMTKEFEVPIPGCQPYRLNLFRLVWRTIFVIVSTVIAMLLPFFNDIVGLIGAIGFWPLTVYLPVEMYIKQTKIPKWSIKWICLQMLSGACLVITLVAAVGSIAGVVGDLKVYKPFVTSY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01165 479 PANTHER OS05G0424000 PROTEIN-RELATED 38 462 - -
Pumo9g01165 479 FunFam Amino acid permease 6 30 469 - -
Pumo9g01165 479 Pfam Transmembrane amino acid transporter protein 34 465 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01165 Pumo-Chr9 35002691 35008125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01165 8 479 Organic Solute Cotransporters AT5G09220 72.000 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01165 K24917 - gmx:100796082 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01165 9 35002691 35008125 Pumo9g01165 9 35002691 35008125 ECH
Pumo10g01736 10 22790449 22793533 Pumo9g01165 9 35002691 35008125 PCT