Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01736 ATGGTAGAGTATGCTTCGAGAACAAACCTTAGCTACCGTCGAGATTATGACATTGAGGAGGACTCCATAGATGGTGTACCTTTAAAAAGTGACCCCGAATGCTATGACGATGATGGGCGTGTTAAACGAACAGGAACCGTTTGGACTACAAGCTCCCACATAATAACAGCTGTGGTAGGATCTGGGGTGCTCTCTTTAGCCTGGGCAATAGCTCAGATGGGTTGGATTGCTGGTCCTGCAGTGATGATCTTATTCAGCATTGTCACTTTGTATACTTCATCCTTTCTAGCTGATTGTTATCGTACCGGTGACCCCTTATTCGGGAAGAGAAATTATACTTTCATGGACGCAGTTAGCTCCATTCTGGGTGGGTACAGTGTTACGTTTTGTGGGATAGTTCAGTACTTGAATCTTTTCGGAAGTGCAATAGGATACACAATTGCGGCTTCCCTTAGCATGATGGCAATCCAAAGGTCTCACTGTATGATCGATTCCTCTGATGGAGAAAATCAATGCCAAATTTCAAGTACCCCATACATGATCGGTTTTGGTGCAGTGCAAATTTTCTTTTCTCAAATTCCAGATTTTCACAACATGTGGTGGCTCTCAATAGTTGCTGCAGTCATGTCTTTCACCTATTCCATAATTGGTCTCGTTCTTGGAATTGCCAAAATTGCAGAAACGGGAACTTTCAAGGGTAGCCTCACTGGAATAAGCATTGGAACTGTGACAGAGGCCCAAAAAGTATGGGGTGTTTTCCAAGCTCTTGGTAACATAGCCTTCGCCTATTCATATTCTTTCGTTCTTCTTGAAATTCAGGATACCATAAAATCTCCGCCATCTGAAGTAAAAACAATGAAGAAGGCTGCAAAGTTAAGTATTGCAGTGACCACAACATTTTATATGCTTTGTGGCTGCATAGGCTATGCTGCTTTTGGAGATTCAGCACCTGGGAACCTGCTCGCTGGATTTGGTTTCCATAAACTATTTTGGCTTATAGATATTGCTAATGCTGCTATTGTAATTCACCTTGTGGGGGCATACCAAGTGTATGCTCAACCCCTCTTTGCCTTCGTCGAGAAGGAGGCAGCAAAAAGATGGCCCGAAATCGAGAAGGAATTCAAAATTTCAATTCCTGGTTTGCAGTCCTACAATCAGAACATATTTAGCCTAGTTTGGAGGACAGTGTTTGTGATCATAACCACTGTTATATCAATGATGCTTCCATTCTTCAACGATATTTTGGGAGTGATTGGAGCATTGGGGTTTTGGCCTTTAACTGTCTACTTTCCTGTGGAGATGTATATCATGCAAAAGAGGATCCCAAAATGGAGTATGAGATGGATTTCTCTTGAATTGATGAGTGTGGTCTGCCTCATAGTAACAATTGTGGCTGGTCTTGGCTCAGTGGTTGGTGTCTTGCTTGACCTCCAGAAATACAAACCATTCAGTTCAAATTATTAA 1464 0.4228 MVEYASRTNLSYRRDYDIEEDSIDGVPLKSDPECYDDDGRVKRTGTVWTTSSHIITAVVGSGVLSLAWAIAQMGWIAGPAVMILFSIVTLYTSSFLADCYRTGDPLFGKRNYTFMDAVSSILGGYSVTFCGIVQYLNLFGSAIGYTIAASLSMMAIQRSHCMIDSSDGENQCQISSTPYMIGFGAVQIFFSQIPDFHNMWWLSIVAAVMSFTYSIIGLVLGIAKIAETGTFKGSLTGISIGTVTEAQKVWGVFQALGNIAFAYSYSFVLLEIQDTIKSPPSEVKTMKKAAKLSIAVTTTFYMLCGCIGYAAFGDSAPGNLLAGFGFHKLFWLIDIANAAIVIHLVGAYQVYAQPLFAFVEKEAAKRWPEIEKEFKISIPGLQSYNQNIFSLVWRTVFVIITTVISMMLPFFNDILGVIGALGFWPLTVYFPVEMYIMQKRIPKWSMRWISLELMSVVCLIVTIVAGLGSVVGVLLDLQKYKPFSSNY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01736 487 Pfam Transmembrane amino acid transporter protein 43 474 IPR013057 -
Pumo10g01736 487 PANTHER OS05G0424000 PROTEIN-RELATED 46 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01736 Pumo-Chr10 22790449 22793533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g01736 22 487 Organic Solute Cotransporters AT5G09220 68.511 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01736 K24917 - gmx:100817699 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01736 10 22790449 22793533 Pumo9g01165 9 35002691 35008125 PCT