Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01103 ATGGCAAAAGTTTGTTGGCCATATTTTGATCCAGAGTATGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTGTGGACAATGATAGTTGCCATGATTGTACACTGATCAAGTTTGATAGTATTAACAAACCTGGAATTCTGCTGGAAGTGGTGCAAATCCTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGTGGATGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAGAAGATAACAGACAGCAAAACGATTGACTTCATTGAAAAGGCTCTAGGACCAAAAGGCCAGAGCACAGAAGGGGTGAAGAGTTGGCAAGGCAAAAGGGTTGGAGTGCACTCAATTGGTGATCACACAGCCATTGAGCTCATCGGTAGAGACCGGCCAGGTCTTTTGTCTGAGATATCAGCAGTCCTTGCCAGCCTCCAATTCAATGTGATTGCAGCTGAAGTTTGGACTCACAACAGGAGAATTGCTTGTGTCCTTTATGTCAATGATGCTACAAACCAAGCCATGGATGACTCAAAAAGATTGTCCATTATGGAGGAGCAGCTCAACCACATCCTTCGCGGGTGTGTGGATGATGAGAAAGTGGCTAGGACCAGTTTCTCAATGGGTTTCACCCACATGGATCGGAGGCTCCACCAAATGCTGTTTGCTGATAGGGACTATGAAAGTGCTGGAGTAACAACAACAGATGTTGATTGTCCTCCTTCTTTTAGGCCAAAAATCAAAATAGAACGTATTGTGGAGAAAGGGTACTCAGTGGTTAGTGTGAAATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTTTGCACTCTCACTGACATGCAATATGTGGTTTTCCATGCTACAATCTCATCGGAAGGGCAATATGCATCCCAGGAGTACTTTATCCGGCACATGGATGGATGCACGCTTGATACTGAAGGAGAGAAAGAAAGGGTCATCAAATGCATTGAAGCTGCCATTAAAAGAAGAGTTAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGACAGAGTGGGGTTGCTATCTGAAGTAACAAGGATTCTAAGAGAGAATGGCTTAACAGTTAGTAGGGCAGGTGTGTCAACCATTGGAGAAAAAGGCCTAAATGTGTTTTATGTGAGAGATGCATCTGGGAACCCTGTGGACATGAAGATCATAGAAGCACTACGCAAGGAAATTGGACAGACAGTGATGGTCAATGTGAAGAGGGTCCCTGGCTATGCCAAAGCACCAGCTGAAACCCGAGGTTGGGCTAAGACAAGCTTCTTCTTTGGGAACTTGTTGGAAAGGTTCTTGACTTGA 1347 0.4447 MAKVCWPYFDPEYENFSNRINPPRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVKSWQGKRVGVHSIGDHTAIELIGRDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDSKRLSIMEEQLNHILRGCVDDEKVARTSFSMGFTHMDRRLHQMLFADRDYESAGVTTTDVDCPPSFRPKIKIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATISSEGQYASQEYFIRHMDGCTLDTEGEKERVIKCIEAAIKRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRAGVSTIGEKGLNVFYVRDASGNPVDMKIIEALRKEIGQTVMVNVKRVPGYAKAPAETRGWAKTSFFFGNLLERFLT 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01103 448 ProSiteProfiles ACT domain profile. 130 213 IPR002912 -
Pumo9g01103 448 Gene3D - 339 419 - -
Pumo9g01103 448 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 417 IPR040217 -
Pumo9g01103 448 ProSiteProfiles ACT domain profile. 37 116 IPR002912 -
Pumo9g01103 448 CDD ACT_ACR_4 342 413 - -
Pumo9g01103 448 Pfam ACT domain 344 404 IPR002912 -
Pumo9g01103 448 Pfam ACT domain 130 167 IPR002912 -
Pumo9g01103 448 Pfam ACT domain 37 85 IPR002912 -
Pumo9g01103 448 Gene3D - 128 201 - -
Pumo9g01103 448 SUPERFAMILY ACT-like 125 198 IPR045865 -
Pumo9g01103 448 SUPERFAMILY ACT-like 32 106 IPR045865 -
Pumo9g01103 448 CDD ACT_ACR_3 264 338 - -
Pumo9g01103 448 ProSiteProfiles ACT domain profile. 344 421 IPR002912 -
Pumo9g01103 448 CDD ACT_ACR_1 35 106 - -
Pumo9g01103 448 SUPERFAMILY ACT-like 340 409 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01103 Pumo-Chr9 31355203 31360163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01103 - - gmx:100789044 874.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01103 9 31355203 31360163 Pumo9g01103 9 31355203 31360163 ECH
Pumo9g01103 9 31355203 31360163 Pumo10g01324 10 17550539 17558271 PCT