Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01324 ATGGCTAAAGTTTGTTGGCCATATTTTGATCCTGAGTATGAGAACTTCAGCAATAGAATGAACCCTCCAAGGGTCTCTCTGGACAATGCTAGTTGCCATGATTGTACACTGATTAAGATTGATAGTGTTAACAAACCTGGAATTCTGCTGGAAGTTGTGCAAATCTTGACAGACCTTGACTTCATAATTACCAAAGCTTACATATCTTCTGATGGGGGTTGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAAAAGATAACAGATAGCAAAACCATCGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCAGAGCACAGAAGGGGTGAAAAATTGGCCGAGCAAACGCGTTGGAGTGCATTCTGTTGGTGATCATACAGCCATTGAGCTAATTGGCAGAGACCGGCCGGGTCTCTTGTCTGAGATTTCAGCTGTTCTTGCCAACCTCAACTTTAATGTTTTTGCAGCAGAAGTTTGGACTCATAACAGGCGAATCGCTTGCGTCCTTTATGTCAATGATGCTACAAACCGAGCTGTGGATGATCCAGACAGATTATCTCTTATGGAGGAGCAGCTCAACAACATCTTACGTGGATGTGATGGTGAGAAAATTGCTAGGACCAGTTTCTCCATGGGTTTCACCCATATGGATCGGCGGCTTCACCAAATGTTGTTTGCTGATCGTGATTATGAAAGCTATGCAGTAGCAAGAGACGTTGATTGCCCTCCCTCTTTCAGGCCAAAGATCACAATAGAACGTTGTGAGGAAAAAGGTTACTCAGTGGTCAGTGTCAAGTGCAAAGATCGGGCAAAACTCATGTTTGACATTGTTTGCACTCTTACTGATATGCAATATGTTGTTTTCCATGCCACAGTCTCATCAGAAGGCCCTTATGCATCCCAGGAGTACTTTATTCGACATATGGATGGATGCACGCTTGATACACAAGGAGAGAAAGAAAGGGTCATCCAATGCATTGAAGCTGCTATTCGAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGGTTGCTGTCTGAAGTAACAAGGATTCTACGAGAGAATGGGTTGACAGTGTGTAGGGCAGGTGTATCAACAAGAGGGGAGCACGCACTGAACGTGTTCTACGTAAGGGATGCATCAGGGAACCCAGTGGACATGAAAACTATAGAAGCACTTCGTAAAGAAATAGGTAAGACAATGATGGTGGATGTGAAGAGAGTACCAAGCAATGCCAAAGCACCAGAGACTCGAGGATGGGCTAAAACTAGTTTCTTCTTTGGTAACTTGTTGGAAAGGTTCTTGACCTGA 1338 0.4425 MAKVCWPYFDPEYENFSNRMNPPRVSLDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALGPKGQSTEGVKNWPSKRVGVHSVGDHTAIELIGRDRPGLLSEISAVLANLNFNVFAAEVWTHNRRIACVLYVNDATNRAVDDPDRLSLMEEQLNNILRGCDGEKIARTSFSMGFTHMDRRLHQMLFADRDYESYAVARDVDCPPSFRPKITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSEGPYASQEYFIRHMDGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTRGEHALNVFYVRDASGNPVDMKTIEALRKEIGKTMMVDVKRVPSNAKAPETRGWAKTSFFFGNLLERFLT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01324 445 SUPERFAMILY ACT-like 125 201 IPR045865 -
Pumo10g01324 445 CDD ACT_ACR_3 262 336 - -
Pumo10g01324 445 Gene3D - 337 418 - -
Pumo10g01324 445 CDD ACT_ACR_2 129 201 - -
Pumo10g01324 445 FunFam ACT domain repeat 6 340 417 - -
Pumo10g01324 445 SUPERFAMILY ACT-like 32 106 IPR045865 -
Pumo10g01324 445 ProSiteProfiles ACT domain profile. 130 209 IPR002912 -
Pumo10g01324 445 ProSiteProfiles ACT domain profile. 342 419 IPR002912 -
Pumo10g01324 445 Gene3D - 128 201 - -
Pumo10g01324 445 CDD ACT_ACR_1 35 106 - -
Pumo10g01324 445 CDD ACT_ACR_4 340 411 - -
Pumo10g01324 445 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 10 415 IPR040217 -
Pumo10g01324 445 Pfam ACT domain 342 402 IPR002912 -
Pumo10g01324 445 Pfam ACT domain 130 199 IPR002912 -
Pumo10g01324 445 Pfam ACT domain 37 85 IPR002912 -
Pumo10g01324 445 SUPERFAMILY ACT-like 338 409 IPR045865 -
Pumo10g01324 445 ProSiteProfiles ACT domain profile. 37 114 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01324 Pumo-Chr10 17550539 17558271 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01324 - - gmx:100789173 870.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01324 10 17550539 17558271 Pumo10g01324 10 17550539 17558271 ECH
Pumo9g01103 9 31355203 31360163 Pumo10g01324 10 17550539 17558271 PCT