Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00676 ATGGCCACTACTACCCTTTCTCAAGCCTATAGGGACCACCCTCTCCACCTTCATCATATTATCCCTTTAGACTTTTCTTCAGTTAGGACCTTACCTGATTCCCATGCATGGCCTCAATCTGAAGATGATGATGATGATGATAATCATGGAGCTGGATCATGCATACCCATCATTGACCTCATGGATCCTAATGCCATGGAACTCATAGGCCTTGCTTGTGAGAATTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTGAGTGTTGTTGAAGAGGTTGAGGAAGAGGCAAAGAGGCTCTTCGCCCTCCCCGCCGACCGGAAACTGAAGGCCCTACGATCGGCCGCCGGTGCCACCGGATACGGCCGAGCTCGGATATCACCCTTCTTCCCCAAGCACATGTGGCATGAAGGGTTCACCATCATGGGGTCTCCATGTGATGATGCCAAAAAGATCTGGCCTAATGACTATGCACGGTTTTGCTACATAATGGACAATTACCAGAAGCAAATGAAGTTGCTCGCAGAGAAGCTAACACACATGATATTCAACTTATTGGGGATTATTTCAGAGGAACAAAAGAGTTGGATTGGTTCAACCAACCTCTGTGAAGCTCTTCAGCTAAACTTCTACCCATCTTGCCCCGAGCCAAACCGAGCCATGGGGCTAGCCCCTCACACTGACACTTCCCTCCTCACAATCCTCCACCAAAGCCAAACCAAGGGCCTCCAAATCTTCAAGGAAGGAGAAGGGTGGGTCCCCGTGCACCCTCATAACCCTAGCACCCTTGTGGTTCACACCGGTGACATTCTTCACATCTTGTCCAACTCGAGGTTCCGATGCGCGATGCACCGTGTTGTGGTGAATGGTACAAGGCAGAGATACTCGGTGGCTTACTTCTATGGCCCCCCTATGGATCATGTGGTTTCTCCTTTGGTTCTTGATGATTCATCCTTTCCTCTGTTTCGGTCCTTGACTGTCAAGGAGTATATTGGCATCAAGGCCAAGAACCTTGGGGGTGCATTGTCTTTAATTAGTATTCTTAATTAA 1053 0.4891 MATTTLSQAYRDHPLHLHHIIPLDFSSVRTLPDSHAWPQSEDDDDDDNHGAGSCIPIIDLMDPNAMELIGLACENWGAFQLKNHGIPLSVVEEVEEEAKRLFALPADRKLKALRSAAGATGYGRARISPFFPKHMWHEGFTIMGSPCDDAKKIWPNDYARFCYIMDNYQKQMKLLAEKLTHMIFNLLGIISEEQKSWIGSTNLCEALQLNFYPSCPEPNRAMGLAPHTDTSLLTILHQSQTKGLQIFKEGEGWVPVHPHNPSTLVVHTGDILHILSNSRFRCAMHRVVVNGTRQRYSVAYFYGPPMDHVVSPLVLDDSSFPLFRSLTVKEYIGIKAKNLGGALSLISILN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00676 350 Gene3D - 18 338 IPR027443 -
Pumo9g00676 350 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 155 IPR026992 -
Pumo9g00676 350 FunFam Gibberellin 3-beta-dioxygenase 1 19 334 - -
Pumo9g00676 350 Pfam 2OG-Fe(II) oxygenase superfamily 206 304 IPR044861 -
Pumo9g00676 350 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 55 331 - -
Pumo9g00676 350 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 202 304 IPR005123 -
Pumo9g00676 350 SUPERFAMILY Clavaminate synthase-like 18 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00676 Pumo-Chr9 12859588 12861921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00676 55 342 Glycosyltransferase AT5G59530 31.169 2.01e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00676 K04124 - gmx:100780857 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00032 10 903414 904868 Pumo9g00676 9 12859588 12861921 PCT