Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00032 ATGGAGACTCTCTCTGAAGCCTACAAAGCACACCCTCTCCACCTCCATCACATTATTCCCTTAGACTTTTCTTCAGCCCCGAGCTTACCTGATTCTCACGCATGGTCTCACTCTCACTCTCAACCCAATGATTATTTCTCATTCAATGCATCATCATCCATACCCATCATAGACCTCATGGATCCTAATGCCATGGACCTCATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTTGGTGTCATTGAAGAGGTTGAAGAAGAAGCCAAGCGACTCTTTAATCTCCCCACCGAACAGAAGTTGAAGGCTCTTAGATCTCCCGGTGGTGCCACTGGGTATGGCAGAGCAAGGATTTCACCGTTCTTCCCCAAGTTCATGTGGCACGAAGGATTCACCATCATTGCTTCTCCCTCTCATGATGCCAAAAAGATATGGCCTAATGATTATGCACCGTTTTGTGATTTGATGGAGAATTATGAGAAGCAAATGAAGGTTCTAGCAGAGAGACTAACAGAGATAATGTTCAACTTGTTGGACATAAGTGAGGAAAAAAGAAAGTGGGTTGGTGCAACCAACATAAGTGGAGCTCTTCAGTTAAATTTCTACCCAAGTTGTCCGGAACCGAACCGAGCCATGGGTCTAGCCCCTCACACCGACACTTCTCTCTTCACAATCCTCCATCAAAGCCAAACCACTGGTCTCCAAATCTTCAAGGAGGGAAAAGGGTGGGTTCCAGTGCACCCTCACCCTAACACTCTGGTCGTTCACACAGGCGATCTCTTACACATCATATCCAACGCAAGGTTCCGTTGTGCCCTTCACCGCGTAACGGTGAATAGGACTCGGAAACGTTACTCTGTGGCTTATTTCTATTCTCCACCGATGGATTATGTGGTTTCTCCTTTGGTCACTAGGGATCTCAACTCTGTTGCTCGTTTTCGCGATGTGACTGTGAAGGAGTATATTCAGATTAAGGCCAAGAATTTTGGAGAAGCACTATCTTTGATTAGTACTAGAAATTAA 1047 0.4594 METLSEAYKAHPLHLHHIIPLDFSSAPSLPDSHAWSHSHSQPNDYFSFNASSSIPIIDLMDPNAMDLIGLACEKWGAFQLKNHGIPFGVIEEVEEEAKRLFNLPTEQKLKALRSPGGATGYGRARISPFFPKFMWHEGFTIIASPSHDAKKIWPNDYAPFCDLMENYEKQMKVLAERLTEIMFNLLDISEEKRKWVGATNISGALQLNFYPSCPEPNRAMGLAPHTDTSLFTILHQSQTTGLQIFKEGKGWVPVHPHPNTLVVHTGDLLHIISNARFRCALHRVTVNRTRKRYSVAYFYSPPMDYVVSPLVTRDLNSVARFRDVTVKEYIQIKAKNFGEALSLISTRN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00032 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 54 332 - -
Pumo10g00032 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 155 IPR026992 -
Pumo10g00032 348 Coils Coil 164 184 - -
Pumo10g00032 348 FunFam Gibberellin 3-beta-dioxygenase 1 17 332 - -
Pumo10g00032 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 301 IPR005123 -
Pumo10g00032 348 Pfam 2OG-Fe(II) oxygenase superfamily 205 301 IPR044861 -
Pumo10g00032 348 SUPERFAMILY Clavaminate synthase-like 16 338 - -
Pumo10g00032 348 Gene3D - 20 338 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00032 Pumo-Chr10 903414 904868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00032 54 329 Glycosyltransferase AT5G59530 30.000 7.84e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00032 K04124 - gmx:100818754 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00032 10 903414 904868 Pumo9g00676 9 12859588 12861921 PCT