Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00644 ATGGGTAGGAGAGGGATCAAGCTATTCGACGAAGAAAGGAACGGTCTTTTCTCAATTTCCAATTTTGGGTCTCAATGGGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGAGGTGGTGGTGTTCTCGACCCTGTGAATAATTTGGCTGTGATTGCAAGTATTAGTCAAATGGGAATGGGGTTTGGTGTGCAAGAACCGAACCCTTCTTCTTCTTCCGATGATTCCCAACACAACGGTGGCATGAGCATGAGCATGAGGATCCCCTGCACGGAGTTGTACGTGAGGTACGTGCAATCGGAGGGGAAGGTGAAGATTCTGGGGGTTCCTGATGAGGAAGAGGTGGTGGAGGGGGTGAAGGGGAAGAAAAAAAGGGGTGTCTTTAAAGGGTTGAGGATTAAGGTGAAGAACCCTTCTCTTAGGAGGTTGGTTAGTGGTGCCTTTGCTGGGGCAGTTTCACGCACCACTGTGGCTCCCTTGGAGACCATAAGGACTCATTTGATGGTTGGAAGTAGTGGCAATTCCACTGGTGAGGTCTTCAGGAATATCATAAAGACTGATGGGTGGAAGGGCTTGTTTAGGGGTAATTTCGTTAATGTCATTCGGGTCGCACCTAGCAAGGCCATTGAGCTATTTGCTTATGATACTGTAAACAAGAACCTCTCACCAAAGCCAGGGGAGCAGCCAAAACTCCCTATTCCAGCATCATTGATAGCAGGTGCTTGTGCTGGAGTTAGTTCAACTATATGCACATATCCTCTAGAGTTACTAAAGACTCGACTAACTATCCAGAGGGGTGTTTATGATGGTCTGCTAGATGCATTCCTGAAAATAGTTAGAGAAGAGGGTGCTGGAGAACTTTACAGAGGCCTTACTCCCAGTCTGATTGGAGTAATTCCATATTCTGCCACCAATTACTTTGCCTATGACACCTTGAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTTTGATAGGATCAGCAGCTGGAGCTATTTCAAGTAGTGCTACCTTTCCACTCGAAGTGGCTCGCAAACACATGCAAGTGGGAGCCCTCAGTGGAAGGCAAGTATACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGATCCAAGGACTGTATAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCATTCATGTGCTATGAAGCATGCAAGAGGATACTGGTAGAGGATGATGATGAGGAGTAG 1269 0.4736 MGRRGIKLFDEERNGLFSISNFGSQWGGGGGGGGGGGGGGGGVLDPVNNLAVIASISQMGMGFGVQEPNPSSSSDDSQHNGGMSMSMRIPCTELYVRYVQSEGKVKILGVPDEEEVVEGVKGKKKRGVFKGLRIKVKNPSLRRLVSGAFAGAVSRTTVAPLETIRTHLMVGSSGNSTGEVFRNIIKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQVYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDDDEE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00644 422 Pfam Mitochondrial carrier protein 232 319 IPR018108 -
Pumo9g00644 422 Pfam Mitochondrial carrier protein 139 222 IPR018108 -
Pumo9g00644 422 Pfam Mitochondrial carrier protein 326 417 IPR018108 -
Pumo9g00644 422 SUPERFAMILY Mitochondrial carrier 139 410 IPR023395 -
Pumo9g00644 422 MobiDBLite consensus disorder prediction 63 84 - -
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 335 357 IPR002067 GO:0055085
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 143 156 IPR002067 GO:0055085
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 156 170 IPR002067 GO:0055085
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 196 216 IPR002067 GO:0055085
Pumo9g00644 422 PRINTS Mitochondrial carrier protein signature 289 307 IPR002067 GO:0055085
Pumo9g00644 422 PANTHER SOLUTE CARRIER FAMILY 25 135 415 - -
Pumo9g00644 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 316 IPR018108 -
Pumo9g00644 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 326 414 IPR018108 -
Pumo9g00644 422 ProSiteProfiles Solute carrier (Solcar) repeat profile. 138 221 IPR018108 -
Pumo9g00644 422 Gene3D Mitochondrial carrier domain 134 420 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00644 Pumo-Chr9 11900956 11903801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00644 323 422 Organic Solute Cotransporters AT4G32400 29.808 1.42e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00644 K14684 - gmx:100816041 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00644 9 11900956 11903801 Pumo9g00644 9 11900956 11903801 ECH
Pumo9g00644 9 11900956 11903801 Pumo10g00066 10 1287778 1292304 PCT