Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00624 ATGGCTTCCAACAAGCTCATTGCCACCATCTTGGTGCTTTCTCTCCTTGCCTACTCAACATTCACCAATGCATGTGGCACATGCCACCCCAAGCCCACCCCTTCTCCCCCTCCTCCAGCAGGGAAGTGCCCCAAGGACACATTGAAGCTAGGGGTGTGTGCTGACATTCTAGGACTTGTTAATGTTGTTGTTGGGTCCCCTGTAACCACCAAGTGTTGTGCATTGCTTCAAGGCTTGGCTGATTTGGAGGCTGCACTTTGCCTGTGCACTGCTATTAAGGCCAATGTGCTTGGAATCAACTTGAATGTGCCAGTCACACTCAGTGTGCTACTTAGTGCTTGCCAAAAAACTGTTCCTTCTGGATTCCAATGTGCATAG 378 0.5 MASNKLIATILVLSLLAYSTFTNACGTCHPKPTPSPPPPAGKCPKDTLKLGVCADILGLVNVVVGSPVTTKCCALLQGLADLEAALCLCTAIKANVLGINLNVPVTLSVLLSACQKTVPSGFQCA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00624 125 Gene3D - 42 125 IPR036312 -
Pumo9g00624 125 FunFam pEARLI1-like lipid transfer protein 1 41 125 - -
Pumo9g00624 125 CDD HPS_like 41 124 IPR027923 -
Pumo9g00624 125 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 46 124 IPR036312 -
Pumo9g00624 125 SMART aai_6 43 124 IPR016140 -
Pumo9g00624 125 Pfam Hydrophobic seed protein 43 125 IPR027923 -
Pumo9g00624 125 PANTHER - 6 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00624 Pumo-Chr9 10904612 10905530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00624 33 124 Acyl Lipid Metabolism Gene Families AT4G22490 36.957 5.42e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00624 - - gmx:100306307 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00624 9 10904612 10905530 Pumo9g00624 9 10904612 10905530 ECH
Pumo9g00624 9 10904612 10905530 Pumo10g00093 10 1613067 1613973 PCT