Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00509 ATGATGATTCGATTTCCATTTGTGGTTCTTGTGTTGATGATAATTTGTGCCATGAGATGCAGAATGGCCAAAGCAGCAGATCAAAGTCCTGATTCTGGGAATGTGTACACGCTGGCTTCAGTGAGAGAGGATTTGGTTAGGCAAGAGGATACCATCATTTATGGTCTCATTGAGAGAGCCAAGTTCCCTAGCAATTCTCACACCTATGATGAAAAGTATGCTCAAATCCCGGGTTGTGGCTCATTGGTGGAATTCATTGTTAAGAATACAGAGGCCATTCAAGCTAAGGCTGGAAGATACAAAAACCCTGAAGAAAATGCCTTCTTCCCAGAAAATTTACCACAATCAATTGTGCCATCTTACCCCTTCGCAAAGTTTTTGCATCCTGGAGCTGCTTCAGTTAACATAAACAAGTCCATCTGGAAAATGTATTTCCAAGAGCTACTTCCATTGCTTGCTACTTCGGGTGATGATGGCAACTATGCACAAACTGCAGCTAGTGATCTTTCATTATTGCAGGCCATCTCTAGAAGGGTTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTACGAGCCTTTAATTCGAGCTAAGGACAAAGAAGGATTGATGAAATTGTTGACATTTACAAGCGTTGAAGAGACGGTGAGGAAGAGGGTTGAAAAGAAGGCCGCGGTGTTTGGGCAGGAAGTGAGTCTTAACAGTGATGATGATGATGACAATGAAAACCGTAAGTTTGATCCATCAGTGGCTTCTAGCTTGTACAAAAATTGGGTGATACCTCTTACCAAGGAGGTTCAGGTTGAGTACCTCTTGTGCCGTCTAGACTGA 849 0.4276 MMIRFPFVVLVLMIICAMRCRMAKAADQSPDSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHTYDEKYAQIPGCGSLVEFIVKNTEAIQAKAGRYKNPEENAFFPENLPQSIVPSYPFAKFLHPGAASVNINKSIWKMYFQELLPLLATSGDDGNYAQTAASDLSLLQAISRRVHYGKFVAEVKFRDAPQDYEPLIRAKDKEGLMKLLTFTSVEETVRKRVEKKAAVFGQEVSLNSDDDDDNENRKFDPSVASSLYKNWVIPLTKEVQVEYLLCRLD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00509 282 PANTHER CHORISMATE MUTASE 23 282 IPR008238 GO:0004106|GO:0009073
Pumo9g00509 282 NCBIfam chorismate mutase 37 282 IPR008238 GO:0004106|GO:0009073
Pumo9g00509 282 SUPERFAMILY Chorismate mutase II 32 282 IPR036263 GO:0046417
Pumo9g00509 282 PIRSF Chor_mut_AroQ_eu 24 282 IPR008238 GO:0004106|GO:0009073
Pumo9g00509 282 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 30 282 IPR037039 GO:0004106|GO:0009073
Pumo9g00509 282 FunFam Chorismate mutase 29 282 - -
Pumo9g00509 282 ProSiteProfiles Chorismate mutase domain profile. 29 282 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00509 Pumo-Chr9 8133946 8137625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00509 K01850 - gmx:100791341 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00509 9 8133946 8137625 Pumo9g00509 9 8133946 8137625 ECH
Pumo9g00509 9 8133946 8137625 Pumo10g00156 10 2328187 2331022 PCT