Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00156 ATGAAGATGCTTCGATTTCTTGTGCTGCTTCTTACGTTGGCAAGTTGTAGGGAGAGTTGCAAAATGGCGAAAGCAGATTATAACTATACGGTAGATTCGGCAAGAGCGTCTTTGGTTAGACAAGAAGACACCATCGTATTTGGTTTGATTGAGAGAGCCAGGTTCCCCTTAAATTCTCCAACCTACAATCAAAGTTACATTTCCATTCCCCAATTTCGTGGCACATTGCTCGACTTTCTCGTTCGAAATACGGAGGCCATTCAAGCGAAGGCTGGAAGATACACTAACCCTGAAGAAAATCCTTTCTTCCCAGAAAATTTACCACCTTCGGTTGTGCCACATTACCCCTTCTCACAGTTTTTGCATCCTGCAGCTGCTTTGATTAACATAAACAAAGCCATTTGGAAACTGTACTTTAATGAGCTGCTTCCAATGTTTGTTGCTTCTGGTGATGATGGCAACTATGCACAAACTGCTGCTACCGATCTTTCGTTGTTGCAGGCCATCTCTAGAAGGATTCATTACGGAAAGTTTGTAGCTGAGGCCAAATTCAGAGAATCTCCTCAAGGCTATGAGCCTTTAATTCGTGCTAAGGACAGAGAAGCATTGATGAAATTGTTGACAACTGAGAGCGTTGAAGAGATGGTGGTGAAGAGGGTTAAAAAGAAGGCCATGGTGTTCGGGCAGGAAGTGAGCCTTGGTTGTGATGCCAAGGGAAAAAAATACAAGGTTGATCCATCAGTAGTTTCTCTCTTGTACAAGAAATGGATAATACCCCTCACAAAAAATGTTGAAGTTGAGTACTTACTAAGCCGCCTCAACTAA 825 0.4267 MKMLRFLVLLLTLASCRESCKMAKADYNYTVDSARASLVRQEDTIVFGLIERARFPLNSPTYNQSYISIPQFRGTLLDFLVRNTEAIQAKAGRYTNPEENPFFPENLPPSVVPHYPFSQFLHPAAALININKAIWKLYFNELLPMFVASGDDGNYAQTAATDLSLLQAISRRIHYGKFVAEAKFRESPQGYEPLIRAKDREALMKLLTTESVEEMVVKRVKKKAMVFGQEVSLGCDAKGKKYKVDPSVVSLLYKKWIIPLTKNVEVEYLLSRLN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00156 274 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Pumo10g00156 274 ProSiteProfiles Chorismate mutase domain profile. 22 274 IPR008238 GO:0004106|GO:0009073
Pumo10g00156 274 PIRSF Chor_mut_AroQ_eu 18 274 IPR008238 GO:0004106|GO:0009073
Pumo10g00156 274 SUPERFAMILY Chorismate mutase II 22 274 IPR036263 GO:0046417
Pumo10g00156 274 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 23 274 IPR037039 GO:0004106|GO:0009073
Pumo10g00156 274 PANTHER CHORISMATE MUTASE 20 274 IPR008238 GO:0004106|GO:0009073
Pumo10g00156 274 FunFam Chorismate mutase 22 274 - -
Pumo10g00156 274 NCBIfam chorismate mutase 31 274 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00156 Pumo-Chr10 2328187 2331022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00156 K01850 - gmx:100791095 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00156 10 2328187 2331022 Pumo10g00156 10 2328187 2331022 ECH
Pumo9g00509 9 8133946 8137625 Pumo10g00156 10 2328187 2331022 PCT