Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g00507 ATGATTACTGTCAAATCAAAGGGAAGAATGGACGGAGTTGTGATTGGCGAGGCACTAAAAATCTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCTGATGCTCATGCCTGGAGGAACAAATCTCTGGTAGAAACAATTGTCTGTTTATTGCCATGCGACAATGGTGTGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTGGTTGAAGCTGATGAGTTTTCAAGGGGACAATTGATGAAGAGCATTGGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTACTGATTCCAGCAAGGATTCCCCAGAACACCAAATATGATGTTGATTTGGTGCAAGATCTTTTGAATCTATACATGACTAACATAAAGGGAAGCTACAATATGGAGGTTGAGGAGAAGAAAGATAAAGCAAATGATGAGTCTATTTTAGGACGGAGGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGGTATCTTGGAGAAATTGCACATGATCCAAATCTCAGCCTCTCTAGTTTTGTTGATCTGTCACAGTCAATTCCAGAGTTTGCCAGACCAAATCATGATGGCCTGTACAGAGCTATAGACATCTACTTGAAGGAGCACCCAAGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGGACGTCAAGAAATTGACAGTGGATGCATCAATGCATGCTGCACAGAATGAACGGCTTCCTCTTCGAGTTGTGGTGCAGGTTCTCTATTTTGAGCAGGTTAGAGCGGCTTCCAACGCTTGCGCACTTGGTAACAGTCCGCGCAATTCCACAAACACTCATGTCAATGGAGATGAAGAGTGTGAGAAATCGGGCGGAGAAAGCTGCCAATCCCTCAACAACCAGATGTGTCACATGAAGGTTAGAGATGAAGAGTTTCACAAGAATGGGAAGTTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCTTGCAGTTGCTGCCATCTAGGTCAAGGAGAATCTTTGATAAGTTATGGATGGTGGGGAAAGGACAAGGTGAAAATAGGAGCTCAGAGACTTCAGGGAGTTCTAATAGCCCAACTTCTGTAGTCCCTGGAGATACCAAATCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAG 1167 0.4267 MITVKSKGRMDGVVIGEALKIYAVRWLPDSVDALVSDAHAWRNKSLVETIVCLLPCDNGVGCSCSFLLKLLKVAILVEADEFSRGQLMKSIGLKLHEASVKDLLIPARIPQNTKYDVDLVQDLLNLYMTNIKGSYNMEVEEKKDKANDESILGRRSLLNVGKLVDGYLGEIAHDPNLSLSSFVDLSQSIPEFARPNHDGLYRAIDIYLKEHPSLTKAERKKICGLMDVKKLTVDASMHAAQNERLPLRVVVQVLYFEQVRAASNACALGNSPRNSTNTHVNGDEECEKSGGESCQSLNNQMCHMKVRDEEFHKNGKLNKKSSKNSRSGLQLLPSRSRRIFDKLWMVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g00507 388 MobiDBLite consensus disorder prediction 351 376 - -
Pumo9g00507 388 Pfam NPH3 family 1 236 IPR027356 -
Pumo9g00507 388 MobiDBLite consensus disorder prediction 267 292 - -
Pumo9g00507 388 PANTHER OS12G0117600 PROTEIN 3 343 IPR043454 -
Pumo9g00507 388 MobiDBLite consensus disorder prediction 348 388 - -
Pumo9g00507 388 ProSiteProfiles NPH3 domain profile. 1 260 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g00507 Pumo-Chr9 8119686 8121302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g00507 45 312 EF-hand Containing Proteins AT3G44820 35.689 4.72e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g00507 - - gmx:100790291 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00507 9 8119686 8121302 Pumo9g00507 9 8119686 8121302 ECH
Pumo9g00507 9 8119686 8121302 Pumo10g00159 10 2347220 2351797 PCT