Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00159 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAACTCTATCAGGTATGTCTCATCTGAATTGGCTACAGATGTCACCGTTAATGTTGGTGATGTTAAGTTTTACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGACTACAAAAATTGTTATCAAAAGCTAATGAAGAGAATTCTGATGATATTTACTTGGATGACTTCCCTGGAGGGCCAAAGGCCTTTGAAATATGTGCAAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCAGCTGAGTACCTTGAGATGACTGAGGATGTTGACAGAGGAAACCTGGTTTTAAAGATTGAGGTGTTTCTTAACTCAAGTATCTTCCGTCGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGCCATGGGCTGAGGATCTGAAGATCGTTGGAAGATGCATAGATTCCATAGCTTCTAAAACTAGTGTGGACCCAGCATACATCACTTGGTCTTACACTTATAATAGGAAATTAACTGAACCTGATAAAATTGTTGAGGACAAGATGACATTTCTAGAGAAAATCGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAACGAGTAATGGTTGCTGTGAAATCAAAGGGAAGAATGGATGGTGTTGTTATTGGGGAGGCACTAAAAACCTATGCATTAAGATGGATACCTGATTCGGTTGATACATTGGTTTCTGATGCCAACACCTCAAGGACCAAATCTGTGGTACAGACAATTGTCTGTTTATTGCCATATGATAATGGCATCGGTTGTTCGTGTAGTTTCTTGCTGAAGCTATTGAGAGTGGCCATATTAGTCAGAGCAAATGAGTCATCAAGAGAGGAATTGATGAAGAGCATTAGCCTCAAATTGCATGAAGCTTTTGTCAAAGATTTACTGATTCCAGCAAGCTCTCCCCAGATTACCACATATGATGTTCATTTGGTACAAGGTATTTTGAATCAATATATGGATCACGAAAAGGGAAGCTGTGGTATGGAGGTTGTTGAGGAGAAACATGGAGGAGAAGATACATATATTTTAGCACGTAGGTCTTTATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGTCTCTCTAGTTTTGTTGATTTGTCACAATCCATTCCAGGTTTTGCTAGACCAGATCATGATGGTCTATACAGAGCTATAGACATCTACTTGAAGGAGCACCCGGATTTGACAAAAGCTGAAAGGAAGAAGCTATGTGGACTGATGGATGTCAGGAAGTTGACAGCAGGTGCTTCTGTGCATGCTGCACAGAATGAACGCCTTCCTCTTCGAGTTGTAGTGCAGGTTCTCTTCTTTGATCAGGTCAGGTCTTCTATCAGCTTTCGAACACCCGGTAACAATAGCGCACGTGACCCTTTATGCTCTCCAATGAACCGAGATGAGGGATGTGAGACAACAGTGGGAGATAGCTGCCAACCCCTTAAGAATCAGATGAGCCATTTGAGGGTCAAGGATGAAGAGTTACATAAACATGGGAAGTTGGGTAAGAAGAATAGCAAAACCAGCAAAAGTGGCATTCAGTTGCTGCCATCGCGGTCAAGGAGAATCTTTGACAAGTTATGGAGTGTGAGAAAAGGGCATGGAGAGAATAGGAGCTCAGAGACTTCAGGGAGTTCTAGTAGCCCAACTTCTTTAGGCCAGGGAGATACCAAATCATATGGCCTATCTTTGAGACACCAGAGGCATTCTATCTCTTAG 1854 0.4159 MKFMKLGSKPDALQADGNSIRYVSSELATDVTVNVGDVKFYLHKFPLLSKSNRLQKLLSKANEENSDDIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRRWKDSIIVLQTTKSLLPWAEDLKIVGRCIDSIASKTSVDPAYITWSYTYNRKLTEPDKIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVAVKSKGRMDGVVIGEALKTYALRWIPDSVDTLVSDANTSRTKSVVQTIVCLLPYDNGIGCSCSFLLKLLRVAILVRANESSREELMKSISLKLHEAFVKDLLIPASSPQITTYDVHLVQGILNQYMDHEKGSCGMEVVEEKHGGEDTYILARRSLLNVGKLVDGYLGEIAHDPNLGLSSFVDLSQSIPGFARPDHDGLYRAIDIYLKEHPDLTKAERKKLCGLMDVRKLTAGASVHAAQNERLPLRVVVQVLFFDQVRSSISFRTPGNNSARDPLCSPMNRDEGCETTVGDSCQPLKNQMSHLRVKDEELHKHGKLGKKNSKTSKSGIQLLPSRSRRIFDKLWSVRKGHGENRSSETSGSSSSPTSLGQGDTKSYGLSLRHQRHSIS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00159 617 Gene3D Potassium Channel Kv1.1; Chain A 4 125 IPR011333 -
Pumo10g00159 617 Pfam NPH3 family 211 463 IPR027356 -
Pumo10g00159 617 FunFam BTB/POZ domain-containing protein NPY2 17 121 - -
Pumo10g00159 617 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Pumo10g00159 617 SMART BTB_4 29 127 IPR000210 GO:0005515
Pumo10g00159 617 PANTHER OS12G0117600 PROTEIN 24 572 IPR043454 -
Pumo10g00159 617 Pfam BTB/POZ domain 25 115 IPR000210 GO:0005515
Pumo10g00159 617 MobiDBLite consensus disorder prediction 574 617 - -
Pumo10g00159 617 SUPERFAMILY POZ domain 22 116 IPR011333 -
Pumo10g00159 617 CDD BTB_POZ_NPY3-like 21 124 - -
Pumo10g00159 617 ProSiteProfiles NPH3 domain profile. 211 488 IPR027356 -
Pumo10g00159 617 MobiDBLite consensus disorder prediction 541 560 - -
Pumo10g00159 617 MobiDBLite consensus disorder prediction 584 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00159 Pumo-Chr10 2347220 2351797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00159 8 487 EF-hand Containing Proteins AT3G44820 33.728 6.58e-91 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00159 - - gmx:100784205 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00507 9 8119686 8121302 Pumo10g00159 10 2347220 2351797 PCT