Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02485 ATGGCATCAAAGTTGTTTAGAGCAAGCCGATCATCTATATCATCAACGTCTGATGCACCTGATGGCCAGAAGCCTCCTTTACCTCCAAGTGTACAATTTGGCCGGAGAACTTCCTCAGGTCGCTATGTCAATTACTCTAGAGATGATCTTGACAGTGAGATAGGGAGTACTGACTTCATGAATTATACAGTGCATATACCACCTACCCCTGATAACCAACCTATGGATCCATCAATCTCACAGAAAGTTGAGGAACAATATGTGTCAAATTCACTTTTCACAGGTGGATTCAACAGCGTTACTCGAGCCCATCTAATGGATAAGGTTATAGAATCTGAAGCAAATCATCCGCAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATTCCTGGTTGTGATTCTAAGGTGATGAGTGATGAACGTGGTGCTGATATTCTTCCATGTGAGTGTGATTTTAAGATATGTAGAGATTGTTATATAGATGCAGTAAAAACAGGAGGTGGGATATGCCCAGGATGCAAGGAGCCATATAAGAACACAGAACTAGATGAAGTGGCTGTAGATAATGGACGTCCCCTTCCACTTCCTCCACCAAGTGGAAAATCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACGAAGTCAGCACTAATGAGGAGCCAAACTGGAGATTTTGATCATAATAGGTGGCTCTTTGAAACAAAGGGGACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGTGGTTTTGGAAATGAAAAAGAGGATGATGTTGTTGAGCCAACTGAGTTGATGAACAGACCCTGGAGACCACTTACCAGGAAACTGAAGATACCTGCTGCTGTTTTGAGCCCATATCGTCTTATCATTTTTATTCGTTTGGTTGTCTTGGCACTGTTCTTGGCGTGGAGGATCAAACACCAAAATACTGATGCAGTATGGCTATGGGGCATGTCTGTTGTTTGTGAGATATGGTTTGCTTTTTCCTGGCTGCTGGATCAACTGCCCAAACTATGCCCAGTGAATCGTTCCACAGATCTTAATGTTCTGAAGGAGAAATTTGAAACACCAACCCCTAACAACCCTACTGGAAAATCTGATCTTCCAGGCATAGATGTCTTTGTTTCTACTGCTGATCCTGAGAAAGAACCTCCTCTTGTCACTGCAAACACTATCTTGTCTATTTTAGCTGCTGATTACCCTGTTGAGAAGCTTTCTTGTTATGTTTCTGATGATGGCGGTGCACTTCTAACTTTTGAGGCAATGGCTGAAGCTGCCAGCTTTGCTAATGTGTGGGTTCCCTTCTGTCGTAAACATGATATAGAGCCCAGGAATCCTGAATCATACTTCAACTTAAAAAGAGACCCTTACAAAAACAAAGTGAAGCCTGATTTTGTCAAGGATCGTAGACGAGTAAAGCGTGAGTATGATGAATTCAAGGTTAGGATCAATAGTCTGCCTGACTCTATCCGTCGCCGGTCAGATGCCTATCATGCAAGAGAGGAAATCAAGGCCATGAAAGTTCAGAGACAAAACAGGGAAGATGAACCTTTAGAAACTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCAGGAACTTGGTTGACTCCTACATCTGAACATTCTAAGGGTGACCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCCAGCGATGAACCTCTTCTTGGAAGTGCTGATGATACAAGGCTCATTGACCTGACTGATGTTGATATCCGTCTTCCCCTTCTTGTTTATGTTTCTCGAGAGAAGCGCCCAGGCTATGATCACAACAAAAAAGCCGGGGCCATGAATGCCTTGGTTCGAGCCTCAGCTATAATGTCTAATGGCCCTTTTATACTCAATCTTGACTGTGACCACTATATCTACAACTCAAAGGCAATGAGGGAAGGTATGTGCTTTATGATGGATCGTGGAGGTGACCGCCTTTGTTATGTCCAGTTCCCCCAGAGGTTTGAAGGAATTGATCCCTCTGATAGATATGCTAATCATAATACCGTCTTCTTTGATGTCAATATGCGAGCCCTTGATGGACTTCAAGGGCCAGTCTATGTGGGAACAGGGTGCCTTTTCAGACGGGTTGCACTTTATGGTTTTGACCCACCGCGTTCTAAAGAGCACCACACAGGTTGCTGTAGTTGTTGCTTTGGTCGTCAGAAGAAGCATGCATCAATGGCAAGCACCCCAGAAGAGCACCATGCACTGAGGATGGGTGATTCTGATGATGAGGAAATGAATCTATCATTGTTCCCTAAGAAGTTTGGAAACTCTACTTTCCTCATTGACTCAATTCCAGTGGCAGAGTTCCAAGGTCGGCCCCTAGCTGATCACCCTGCTGTGAAAAATGGACGTCCACCTGGTGCTCTCACCATACCCCGCGATCTTCTTGATGCATCAACTGTTGCAGAAGCCATCAGTGTCATCTCCTGTTGGTATGAGGACAAGACTGAGTGGGGAAATCGCGTTGGATGGATCTATGGATCTGTGACAGAGGATGTGGTCACTGGGTATAGGATGCACAATAGGGGATGGAAATCAGTTTACTGCGTGACCAAGCGTGATGCCTTCCGTGGAACTGCTCCCATCAATCTCACTGACAGGCTGCATCAGGTCCTTAGATGGGCTACTGGGTCGGTTGAAATATTCTTCTCTCGAAACAATGCGCTCCTGGCTAGCCCAAGAATGAAAATTCTTCAAAGAATTGCATACCTAAATGTTGGAATCTACCCCTTCACATCCATATTCCTAATTGTCTACTGCTTCCTTCCTGCACTATCCCTCTTCTCTGGCCAGTTCATTGTTCAAACCCTCAATGTCACTTTTCTTTCTTACCTCTTGGGCATCACTGTGACTTTGTGCATGCTTGCAGTGCTTGAAATTAAGTGGTCTGGCATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTCTGGCTGATTGGAGGGACCAGTGCCCATCTAGCTGCTGTGCTTCAAGGTTTGCTCAAAGTCATAGCAGGGATTGAAATCTCATTCACATTGACTTCAAAATCAGGTGGTGATGATGTAGATGATGAGTTTGCTGATCTCTATATTGTGAAATGGACATCCCTTATGATACCACCTATCACAATTATGATGGTTAACTTAATAGCAATAGCAGTTGGAGTTAGCAGAACCATATACAGTGTCATACCACAATGGAGCCGTCTACTAGGTGGTGTTTTCTTCAGTTTTTGGGTCTTGGCTCATCTCTATCCCTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCTACCATAGTTTTTGTATGGTCAGGCCTCATAGCAATCACAATTTCTCTCCTCTGGGTGGCTATCAACCCCCCTGCTGGTACTAACCAAATTGGGGGTTCATTCCAATTCCCATGA 3432 0.4438 MASKLFRASRSSISSTSDAPDGQKPPLPPSVQFGRRTSSGRYVNYSRDDLDSEIGSTDFMNYTVHIPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIESEANHPQMAGAKGSSCAIPGCDSKVMSDERGADILPCECDFKICRDCYIDAVKTGGGICPGCKEPYKNTELDEVAVDNGRPLPLPPPSGKSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGGFGNEKEDDVVEPTELMNRPWRPLTRKLKIPAAVLSPYRLIIFIRLVVLALFLAWRIKHQNTDAVWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKVQRQNREDEPLETVKIPKATWMADGTHWPGTWLTPTSEHSKGDHAGIIQVMLKPPSDEPLLGSADDTRLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHHTGCCSCCFGRQKKHASMASTPEEHHALRMGDSDDEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGNRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKILQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSFQFP 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02485 1143 MobiDBLite consensus disorder prediction 1 21 - -
Pumo8g02485 1143 FunFam cellulose synthase-like protein D3 578 715 - -
Pumo8g02485 1143 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 272 1119 - -
Pumo8g02485 1143 SUPERFAMILY RING/U-box 112 181 - -
Pumo8g02485 1143 FunFam Cellulose synthase-like protein D3 110 192 - -
Pumo8g02485 1143 Pfam Cellulose synthase 373 1134 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo8g02485 1143 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 580 715 IPR029044 -
Pumo8g02485 1143 Pfam RING/Ubox like zinc-binding domain 129 178 - -
Pumo8g02485 1143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 191 IPR013083 -
Pumo8g02485 1143 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02485 Pumo-Chr8 61992527 61998618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02485 6 1143 Glycosyltransferase AT3G03050 85.153 0.0 2045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02485 K20924 - gmx:100792604 2300.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00452 11 16455975 16464840 Pumo8g02485 8 61992527 61998618 ECH
Pumo8g02485 8 61992527 61998618 Pumo8g02485 8 61992527 61998618 ECH