Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g00452 ATGGCCACCCTCCACACAGAAACCGTTCAACCATGGTTGGCCCTGAGTAGGCTCCACATCCTCATCCACTTGGTGGCAGTGTTGTTCCTCTGTTACTACCGCATAAGCCACCTGTTGCTGCAACCAAGTGTGCCATGGCTTCTCATGACCTCAGCGGAGCTTATCCTCGGCGAGCTATGGTTCTTGAACCAGGCATTCCGGTGGCATCCCGTGTCGCGGACGGTGATGCTGGAGAAGTTGTCGAGCCCCGACACCCTGCTGCCGGGACTCGACATCTTTGTGTGCACGGTCGATCCCGGAAAGGAGCCGACCGTGCAAGTCATGGACACAGTTGTTTCCGCCATTGCCATGGACTACCCCTCTGACAAGCTCGCCGTGTATCTCTCCGACGACGGCGGCTGTCCGGTGACTTTGTATGGGATCAGAGAGGCTTGTCAATTCGCAAAGGATTGGGTTCCTTTCTGCAGAAAATATGGGATCAAGTCAAGGTGTCCCAAGGCCTTCTTCTCTCCCATGGGGGAGGATGAACGTCATGAATTGCTTCTTTGCAACCATGAATTCAAGGCAGAGCAAGAGCAACTCAAGGCTAAATACAATAAAATGCAAAAAAATATTGACAAATTTGGAAGGGACCCTAAAAATTGTTTCATTGTGCTTGATAGACCTACTCGCATTGAGATTATAAATGACGACCAATCAGAAATGCCACTTGTTGTTTATGTGTCTCGTGAAAGAAGGCCAATTGTTCCTCATAGATACAAAGGAGGAGCCCTCAACACATTGCTCAGAGTCTCAGGTCTATTCAGTAACGGGCCTTATGTACTTGTAGTTGATTGTGATATGTATTGTAATGATCCATCCTCAGCTAAACAAGCCATGTGCTTTTTTCTTGATCATGAAACCTCCAAAGATGTTGCTTTTGTCCAATTCCCTCAAATGTTTCACAACATTAGCAAGAAAGACATCTATGATAGTCAAACTAGGCATGCTTTTAAGACAATGTGGCAAGGAATGGATGGACTAAGAGGTCCAGGTCTTTCTGGTAGTGGCAATTACTTACGTAGAAGTGCATTACTCTTTGCAAGCCCAAATGAAAAAGATGGCTATGAACATAATGCCCAAAACAAATTTGGCAACTCTACCATGTACATTGAATCATTAAAGGCCATTCATGGACAACAAACTTCCAAAACGAACATTGCAAGAAATGTGATTTTACAAGAAGCTCGAGCAGTGGCCTCTTGTTCCTATGAAATAGACACAAATTGGGGAAAAGAGGTAGGATTCTCATATGCTATATTACTAGAGAGTACAGTTACTGGCTATCTTCTCCACTGCAGAGGATGGAGATCAACTTACCTTTACCCTAAAAGACCTTGTTTCTTGGGATGTGCCCCCACTGACTTCATGGAAGGCATGCTTCAGTTGGTGAAATGGTCTTCTGAACTTTTCTTGCTAGGAGTATCCAAATACAGCCCTTTCACTTATGGGATTTCAAGAATGCCTATTATGCACAACTTTACCTTTTGCTACTTGACATCCACATCTCAATATGTTGTTGCCTTAATAGTATATGGCATCATTCCTCAAGTATGCTTCTTGAAAGGAATTCCTGTGTTTCCAAAGGTTACAGAACCATGGTTTATAGTTTTTGCAATATTATATGTATCCACTCAAAGTCAACATTTGATTGAAGTCCTTTATGACGGTGGCTCTTTGAGAACGTGGTGGGATGAACAAAGAATTTGGATTCTAAGGTCACTTATTGGAAGCATATTTGCACCTATAGTAGCAACCAAGAAACTTTTTGGGTTGAACAAAGCAAAATTCACTTTATCAAACAAAGTTGTTGACAAAGAGAAGTTAAAGAAATATGAACAAGGTCAGTTCAATTTTGAAGGTGCAGCTTTGTTCATGTCTCCATTGGTTGTATTACTCATAGTGAACATTGTTTGCTTCTTTGGTGGATTATGGAGACTACTTAATGTGAAAGATTTTGAAAAGATGTTTGGCCAACTTTTTCTACTCAGCTATCTGGTGGCTCTCAGTTATCCCATTTTAGAGGGGATAATAACTATGAAAAACAAGGTTGGGTAG 2097 0.4249 MATLHTETVQPWLALSRLHILIHLVAVLFLCYYRISHLLLQPSVPWLLMTSAELILGELWFLNQAFRWHPVSRTVMLEKLSSPDTLLPGLDIFVCTVDPGKEPTVQVMDTVVSAIAMDYPSDKLAVYLSDDGGCPVTLYGIREACQFAKDWVPFCRKYGIKSRCPKAFFSPMGEDERHELLLCNHEFKAEQEQLKAKYNKMQKNIDKFGRDPKNCFIVLDRPTRIEIINDDQSEMPLVVYVSRERRPIVPHRYKGGALNTLLRVSGLFSNGPYVLVVDCDMYCNDPSSAKQAMCFFLDHETSKDVAFVQFPQMFHNISKKDIYDSQTRHAFKTMWQGMDGLRGPGLSGSGNYLRRSALLFASPNEKDGYEHNAQNKFGNSTMYIESLKAIHGQQTSKTNIARNVILQEARAVASCSYEIDTNWGKEVGFSYAILLESTVTGYLLHCRGWRSTYLYPKRPCFLGCAPTDFMEGMLQLVKWSSELFLLGVSKYSPFTYGISRMPIMHNFTFCYLTSTSQYVVALIVYGIIPQVCFLKGIPVFPKVTEPWFIVFAILYVSTQSQHLIEVLYDGGSLRTWWDEQRIWILRSLIGSIFAPIVATKKLFGLNKAKFTLSNKVVDKEKLKKYEQGQFNFEGAALFMSPLVVLLIVNIVCFFGGLWRLLNVKDFEKMFGQLFLLSYLVALSYPILEGIITMKNKVG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g00452 698 Coils Coil 184 211 - -
Pumo11g00452 698 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 452 IPR029044 -
Pumo11g00452 698 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 167 IPR029044 -
Pumo11g00452 698 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 210 371 IPR029044 -
Pumo11g00452 698 FunFam Cellulose synthase-like protein G2 isoform A 77 167 - -
Pumo11g00452 698 Pfam Cellulose synthase 90 367 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo11g00452 698 Pfam Cellulose synthase 371 697 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo11g00452 698 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 15 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g00452 Pumo-Chr11 16455975 16464840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g00452 17 695 Glycosyltransferase AT4G24010 33.145 1.32e-145 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g00452 - K26483 gmx:100802222 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g00452 11 16455975 16464840 Pumo8g02485 8 61992527 61998618 ECH
Pumo11g00452 11 16455975 16464840 Pumo11g00452 11 16455975 16464840 ECH