Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02401 ATGTTGAAATTGTTTACTCTTCGGGGGCTGCCATGGAGCTTGAGTAGTGGTGGTCAGGAAAAGGTTGAGCTAACAGCTGTTGAAGTAGAGTCACTTCGATCAGAACTTGCTGATATAGAAGAGAGGGAAGCTCAATTGAAAGCTCAGTTGGAAAATATTGATGAAATCTTGCGGTCAGCTCGTCTATCTGGCTATTTGTACATTCGTAAAAGATGGGCAGCACTTCCAGGAGAACCTCCACCTATAGATGATACTGACATAGATGATTGGGTTCCTCGCTTTGTTGTTCTTCAGGGTGCATGTCTATTCATATATTTGTTGTGTACAGATCTAAGTCCTCATGACTCAACGCTTCTATCTGATATTGTTGAAGTAGACCAACTACCATGTTTTAAGCGTGAAGAAGATGATGAGACACGATACGCCTTTTATATTTTAACTCATCATGGTTTACGATATGAATGTTCAAGCAGTTCCAAGATACAGGTGGACTCGTGGATATCAGCTTTACACTCCGACTGCAAATTGGAATCTGATACATCAACTCCCAATGGTTCAATAGAGTTGTAA 570 0.4088 MLKLFTLRGLPWSLSSGGQEKVELTAVEVESLRSELADIEEREAQLKAQLENIDEILRSARLSGYLYIRKRWAALPGEPPPIDDTDIDDWVPRFVVLQGACLFIYLLCTDLSPHDSTLLSDIVEVDQLPCFKREEDDETRYAFYILTHHGLRYECSSSSKIQVDSWISALHSDCKLESDTSTPNGSIEL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02401 189 Pfam PH domain 63 173 IPR001849 -
Pumo8g02401 189 SUPERFAMILY PH domain-like 58 174 - -
Pumo8g02401 189 PANTHER OS05G0595500 PROTEIN 1 182 - -
Pumo8g02401 189 SMART PH_update 60 177 IPR001849 -
Pumo8g02401 189 Gene3D - 57 183 IPR011993 -
Pumo8g02401 189 Coils Coil 22 59 - -
Pumo8g02401 189 ProSiteProfiles PH domain profile. 59 175 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02401 Pumo-Chr8 61242578 61245077 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02401 - - gmx:100803809 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02401 8 61242578 61245077 Pumo6g00411 6 5228261 5232513 PCT