Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00411 ATGGATGATGGTCCTGCAAAATTAAAAATCATCCCTGATCACTTTCAAGTTCCAACATCAAGTATAGAATCTCCTGAGAGCAGAACATCATCTATTACAGAACCTGGAACTGATCAATCTTCAAGGTCCTCGAGCCATCAACGGAATCGAAGAAAATTAAGGACGGCTTTCATGTTGAACTTGTTTACTCCACGGCGGCTGTCATGGGGTTCCAGTACTGGAGGTCAGGAAAAGGTTGAGCTAACAGCTGCAGAATTAGAGTCACTTCGATCGGAGCTTGCTGATATAGAGGAGAGGGAAGCTCACTTGAAAGCTCAGTTGGAACATATTGATGAAGTTTTGCGGTCTGCTCGTCTATCTGGATATTTATACATTCGAACTAGATGGGCAGCACTACCAGGAGAACCTCCACCTTTAGATGATACTGAAGTAGATGATCGGCTTCCTCGTTTTGTCGTTCTCCATGGAGCATGTATATTTTTATATTTGTTGTGTACAGACCTAAGCCCCCAGGACTCAACCCTTCTATCTGATATTGTTGAAGTAGGGAGATTACCATGTTTTAAGCGAGAAGATGATGAAATTCAATATGCCTTTTATATTTTAACTTGTCATGGATTACGCTATGAGTGCTCAAGCAATTCTAAGATACAGGTGGACTCTTGGTTATCAGCTTTACAAAGTGACTGCAAATTGGAATCTGATTCATTTTGTAAAGCTGACTGCAAACTGGAATCTGATACATCAGTTCCCAATGGTTCGATTGAGATGTAA 774 0.4109 MDDGPAKLKIIPDHFQVPTSSIESPESRTSSITEPGTDQSSRSSSHQRNRRKLRTAFMLNLFTPRRLSWGSSTGGQEKVELTAAELESLRSELADIEEREAHLKAQLEHIDEVLRSARLSGYLYIRTRWAALPGEPPPLDDTEVDDRLPRFVVLHGACIFLYLLCTDLSPQDSTLLSDIVEVGRLPCFKREDDEIQYAFYILTCHGLRYECSSNSKIQVDSWLSALQSDCKLESDSFCKADCKLESDTSVPNGSIEM 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00411 257 SUPERFAMILY PH domain-like 111 228 - -
Pumo6g00411 257 Coils Coil 79 113 - -
Pumo6g00411 257 PANTHER OS05G0595500 PROTEIN 1 249 - -
Pumo6g00411 257 MobiDBLite consensus disorder prediction 1 49 - -
Pumo6g00411 257 MobiDBLite consensus disorder prediction 17 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00411 Pumo-Chr6 5228261 5232513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00411 - - gmx:113002366 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00411 6 5228261 5232513 Pumo6g00411 6 5228261 5232513 ECH
Pumo8g02401 8 61242578 61245077 Pumo6g00411 6 5228261 5232513 PCT