Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02363 ATGAAGGACTCTAAGGAGTTCGCTCTGGAACTATTCGACGCTCTGACTCGTAGACGAAGACTGAAGGTTGAAAAGATCAGCAGAGACGAGCTTAACGAATTCTGGTCGCAAATTACCGATCAAAGCTTTGATTCGCGGCTTCAGATCTTCTTCGACATGGTGGACAAGAATGAAGATGGTAGAATTGCCGAAGAAGAAGTGAAAGAGATCATTATGCTAAGCGCTTCAGCAAATAAGTTATCCAGATTGAAAGAGCAGGCCGAAGAATACGCAGCTCTGATCATGGAAGAGTTAGACCCTGAAAGACTTGGCTACATTGAGCTATGGCAATTGGAGACGCTTCTGTTACAAAAGGACACGTATCTCAACTACAGCCAAGCACTAAGCTACACCAGTCAAGCTTTGAGCCAGAACCTACAAGGACTGAGGGCGAGAAGTCCGATACGTAGGATGAGCCGCAGAATGCTCTACTATTTGCAAGAAAATTGGAGGAGACTTTGGGTTTTAGCGTTGTGGATTTCCGCTATGATTGGGCTGTTTACGTGGAAGTTCATTGAGTACAAGAGAAAAAATGCTTATCATATCATGGGTTACTGTCTACTCGCGGCCAAAGGTGCAGCTGAGACTCTGAAGTTCAACATGGCACTTATACTCTTGCCCGTCTGCAGAAATACCATAACTTGGCTCAGGTCCACCAAGTTGGCTTACATTGCACCTTTCGATGATAACATCAACTTTCATAAGACAATTGCCGCGGCAGTAGTGATTGGTGTTATACTTCATGCCGGGAATCACCTTGCTTGTGATTTTCCTAGACTTGTAAATTCGTCTGAAGTTATTTATCACAAGTATTTGGGTGGCGTATTTGGTGATCATAAACCCAGTTACGGAGACCTCGTTAAAGGGGTTGAGGGTGTGACTGGAATTCTGATGGTGATTTTGATGGCAATAGCATTTACTCTTGCAACAAAATGGTTCAGGAGAAATCTCATTAAGCTTCCTAAACCGTTTAATAGGCTCACTGGTTTCAATGCGTTCTGGTATTCACACCATCTATTTGTGATTGTCTATGTCCTGCTCATCATTCATGGTGTAAATCTTTACCTCGAGCGCAGATGGCACCTTCAAACGACATGGATGTATCTTGCCGTTCCAATTTTACTTTATGCGGGAGAAAGAACGCTAAGATTCTTCCGTTCTGGTTTCTATACAGTCCATCTTATAAAGGTTGCCATTTATCCTGGAAATGTTCTGACCTTGCAAATGTCGAAGCCGTCTCAATTTCGTTACAAGAGCGGACAATACATGTTTGTGCAATGTCCTGCGGTTTCTCCATTTGAGTGGCATCCGTTTTCTATTACCTCTGCCCCGGATGATGATTACCTGAGTGTTCACATACGGCAACTGGGAGATTGGACACAGGAGCTCAAAAGGGTATTCTCTGCGGCCTGTGAGCCTCCCGTAGCTGGGAAGAGCGGGCTTCTCAGGGCTGATGAAACCACCAAGAAATGTTTGCCAAAGCTAAGGATAGATGGACCTTACGGTGCGCCAGCACAAGACTACAGAAACTATGATGTCCTGTTACTTGTCGGTCTTGGGATAGGAGCAACACCTTTTATCAGCATTCTAAAAGATCTTCTCAACAATATTATCAAAATGGAGGAGCTGGCGGATTCAGTCTCTGATTCAAGTAGAGGTTCAGACCTTAGCACTGGGAGTGCAGATTCACTATCTTTTAATAAGATTTCTCCTAAACGGAAGAAGACACTGAAGACTACCAACGCTTATTTCTACTGGGTAACAAAAGAACAAGGTTCTTTCGATTGGTTTAAAGGGGTCATGAATGAAGTTGCTGAACTTGATCATAGGGGTGTTATTGAGATGCACAACTACTTAACTAGCGTATACGAGGAAGGCGATGCCAGATCCGCCCTCATTACAATGGTGCAAGCCCTCAACCATGCAAAAAATGGAGTTGATATTGTTTCTGGGACTAGGGTGAGAACTCATTTTGCTAGGCCTAACTGGAAGAAGGTTTTCTCTAAAATATGTTCTAAGCACAGCAATGGACGAATAGGGGTATTCTATTGTGGCGTACCGGTTTTGGCCAAAGAATTAAGCAAGCTCTGCTTCGAGTTCAACGAAAAAGGTCAAACAAAATTTGAGTTCCATAAGGAGCATTTCTAA 2187 0.4353 MKDSKEFALELFDALTRRRRLKVEKISRDELNEFWSQITDQSFDSRLQIFFDMVDKNEDGRIAEEEVKEIIMLSASANKLSRLKEQAEEYAALIMEELDPERLGYIELWQLETLLLQKDTYLNYSQALSYTSQALSQNLQGLRARSPIRRMSRRMLYYLQENWRRLWVLALWISAMIGLFTWKFIEYKRKNAYHIMGYCLLAAKGAAETLKFNMALILLPVCRNTITWLRSTKLAYIAPFDDNINFHKTIAAAVVIGVILHAGNHLACDFPRLVNSSEVIYHKYLGGVFGDHKPSYGDLVKGVEGVTGILMVILMAIAFTLATKWFRRNLIKLPKPFNRLTGFNAFWYSHHLFVIVYVLLIIHGVNLYLERRWHLQTTWMYLAVPILLYAGERTLRFFRSGFYTVHLIKVAIYPGNVLTLQMSKPSQFRYKSGQYMFVQCPAVSPFEWHPFSITSAPDDDYLSVHIRQLGDWTQELKRVFSAACEPPVAGKSGLLRADETTKKCLPKLRIDGPYGAPAQDYRNYDVLLLVGLGIGATPFISILKDLLNNIIKMEELADSVSDSSRGSDLSTGSADSLSFNKISPKRKKTLKTTNAYFYWVTKEQGSFDWFKGVMNEVAELDHRGVIEMHNYLTSVYEEGDARSALITMVQALNHAKNGVDIVSGTRVRTHFARPNWKKVFSKICSKHSNGRIGVFYCGVPVLAKELSKLCFEFNEKGQTKFEFHKEHF 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02363 728 Coils Coil 73 93 - -
Pumo8g02363 728 ProSiteProfiles EF-hand calcium-binding domain profile. 42 77 IPR002048 GO:0005509
Pumo8g02363 728 SUPERFAMILY EF-hand 6 124 IPR011992 -
Pumo8g02363 728 FunFam Respiratory burst oxidase homolog A 391 483 - -
Pumo8g02363 728 Pfam Ferric reductase NAD binding domain 524 710 IPR013121 GO:0016491
Pumo8g02363 728 CDD NOX_Duox_like_FAD_NADP 407 670 - -
Pumo8g02363 728 Pfam Respiratory burst NADPH oxidase 1 45 IPR013623 GO:0004601|GO:0050664
Pumo8g02363 728 SUPERFAMILY Riboflavin synthase domain-like 403 517 IPR017938 -
Pumo8g02363 728 Pfam FAD-binding domain 404 517 IPR013112 GO:0016491
Pumo8g02363 728 PANTHER NADPH OXIDASE 7 728 - -
Pumo8g02363 728 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 400 520 IPR017927 GO:0016491
Pumo8g02363 728 Gene3D Translation factors 392 483 - -
Pumo8g02363 728 ProSitePatterns EF-hand calcium-binding domain. 55 67 IPR018247 -
Pumo8g02363 728 Gene3D - 1 63 - -
Pumo8g02363 728 PRINTS Cytochrome B-245 heavy chain signature 306 329 IPR000778 GO:0016020|GO:0016491
Pumo8g02363 728 PRINTS Cytochrome B-245 heavy chain signature 529 546 IPR000778 GO:0016020|GO:0016491
Pumo8g02363 728 PRINTS Cytochrome B-245 heavy chain signature 506 519 IPR000778 GO:0016020|GO:0016491
Pumo8g02363 728 FunFam Respiratory burst oxidase protein A 515 728 - -
Pumo8g02363 728 Pfam Ferric reductase like transmembrane component 205 361 IPR013130 -
Pumo8g02363 728 Gene3D - 515 728 IPR039261 -
Pumo8g02363 728 CDD EFh 25 72 IPR002048 GO:0005509
Pumo8g02363 728 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 521 728 IPR039261 -
Pumo8g02363 728 SFLD NADPH oxidase subgroup (NOX) 1 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02363 Pumo-Chr8 60846605 60855064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02363 1 728 Miscellaneous Gene Families AT1G64060 82.555 0.0 1280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02363 K13447 - gmx:100805517 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02363 8 60846605 60855064 Pumo8g02363 8 60846605 60855064 ECH
Pumo8g02363 8 60846605 60855064 Pumo6g00454 6 5638713 5646935 PCT