Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02340 ATGGGGGACGACGACACCGTTTTCGTGACGGAGAATCTGCTTAGGATTTTAAACAAGTACGACCACAACCAGATGTACTACATTGGGAGCTTGTCGGAGAGTCACTTGCAGAACATTTTCTTCTCCTACGGCATGGCCTATGGTGGAGGCGGTTTCGCCATAAGCTACCCGTTGGCCAAAGCATTGCAGAAAATGCAGGACCGTTGTATTCAGAGGTATCCTAGTCTGTATGGTTCCGATGATCGAATGCAAGCTTGCATGGCTGAACTCGGTGTTCCACTCACTAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGGAACTTGTTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTGTCACTACACCACCTTGATGTGGTTGAGCCAATCTTCCCCAATGCCACTAGAGTAGAAGCCATTAAACGGTTGACCATTCCAATGAAGCTTGACTCAGCATCTCTCATTCAACAATCTATTTGCCATGACAAAAATAGGAGATGGACCATTTCAGTGTCATGGGGTTTTGCTGTTCAGATATTTCGCGGGATATTTACACAACGGGAGATGGAAATGCCTTCAAGAACATTCCTCAACTGGTATAGAAGAGCAGATTACACTGCATATGCATTCAACACACGCCCATTTAGCAGAAACCCATGTCAGAAGCCTTTTGTATTTTACTTTTCAAAGGCAAAACTCAATTCTTCATTGCAACAGACAGTGACTGAATATGAAAGAGATCCGGTTCCTCCTCCAGAATGTCGATGGAATATGGCTGATCCTTCTGCTCTTGACAAAATAGAAGTGCATAAGAAGCGAGACCCGCATCTATGGGATAGAGTAATTAAGTTCTTCTCAATGTCACACAAATATTTCATTACTATTAACATCATCCCATTCCCACCCATTTTTGTTTCCTATAGTCCTCCAAACTATAAAGATATTAAAATTTGA 963 0.4299 MGDDDTVFVTENLLRILNKYDHNQMYYIGSLSESHLQNIFFSYGMAYGGGGFAISYPLAKALQKMQDRCIQRYPSLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEAIKRLTIPMKLDSASLIQQSICHDKNRRWTISVSWGFAVQIFRGIFTQREMEMPSRTFLNWYRRADYTAYAFNTRPFSRNPCQKPFVFYFSKAKLNSSLQQTVTEYERDPVPPPECRWNMADPSALDKIEVHKKRDPHLWDRVIKFFSMSHKYFITINIIPFPPIFVSYSPPNYKDIKI 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02340 320 Gene3D - 1 159 - -
Pumo8g02340 320 PANTHER FRINGE-RELATED 1 281 - -
Pumo8g02340 320 Pfam Protein of unknown function, DUF604 37 284 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02340 Pumo-Chr8 60646060 60650917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g02340 1 283 Glycosyltransferase AT4G23490 79.859 1.79e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02340 - - gmx:100801504 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02340 8 60646060 60650917 Pumo8g02340 8 60646060 60650917 ECH
Pumo8g02340 8 60646060 60650917 Pumo6g00472 6 5907190 5911652 PCT