Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00472 ATGGGTGAGAAAGAGTCAGAGAAGCTAATTTGGGAACAGATGAGAACCCCCACAGCTGGCACTCCCATTGCAGCAAGTTCCGCACAGCACCGAACCTTACCGAAGCTTTTAGTCCTTCTCATCCTCTTCGTCTCCGTCACTTACGTCGTCTACACGCTCAAGCTTGTCTCAACCTCACGCGCCTGCAACGACGCGCCATTCTCCACCGACACCTTCTCCAAAAGCATCCTCGCCGTCAATGCCACCGCCTCCGCCGCCGCCGCTCTCCGGCGAGAGTCCCGCGAGACGAACTCCGAGGACCGGACGGAGCTCCGCCACGTGGTGTTCGGAATCGCGGCGTCGGCGAAGCTGTGGGAGCAGAGGAAGAGCTACATCAAGCTCTGGTACCGGGCGAGGGACATGCGCGGCGTGGTGTGGCTCGACGAGAAGGTGAAGTCGGAGGAAGACAGCGAGGCGCTCCCGCCGGTGAGAATCTCCGGCGACACCGCGAGGTTCAAGTACACGAACAAGCAGGGGCACCGGTCGGCGATTAGGATCTCGCGGATCGTGTCGGAGACGCTGCGGCTGGGGATGAAGGACGTGCGGTGGTTCGTGATGGGCGACGACGACACCGTTTTCGTCACCGAAAACCTAATTCGCGTATTGAGAAAATACAATCACAATCAGTTCTATTACATTGGGAGTTTGTCGGAGAGTCACTTGCAGAACATTTTCTTCTCTTACAACATGGCCTATGGTGGAGGAGGTTTTGCAATTAGTTACCCTCTCGCGAAGGCTCTTTACAAAATGCAGGACCGTTGCATTCAGCGTTACCCGGGTCTCTATGGTTCTGATGATAGAATGCAAGCGTGTATGGCCGAACTCGGTGTTCCACTCACCAAGGAAATCGGTTTTCACCAGTATGATGTGTATGGAAACCTGTTTGGCCTTCTAGCATCTCATCCCGTGACTCCATTGGTGTCACTGCACCACCTTGATGTGGTTGAGCCAATATTCCCCAATGTGACCCGAGTAGAAGCCCTTCAACGGCTCACTATACCAATGAAGCTTGACTCAGCAGGGCTCATGCAGCAATCCATCTGCCACGACAAATCAAAGAGCTGGACTGTTTCTGTTTCGTGGGGTTTTGCTGTTCAGATATTTCGTGGCGTGTTTTCACCTCGTGAGATGGAAATGCCTTCAAGAACATTCTTGAATTGGTATAGAAGAGCAGATTACACTGCATATGCATTTAACACACGTCCAGTTAGCCGAAATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAGGCAAAATACAATTCTACAATGCAACAAATAGTGAGTGAATATGAAAGGCACCGCGTCCCTCATCCTGATTGCAAGTGGAAGATGGCTAATCCTGCTGCTCTTGACAAAGTGGAGGTATACAAGAAGCCAGATCCGCATCTATGGGATAGAGCTCCGAGGAGAAACTGTTGCAGAGTGAAGAAGTCAAAGGAGAAAGGGACCATGGTGATAGAAGTGGGTATGTGTAGGGAAGGTGAGGTAAGCGAAACATAA 1545 0.5165 MGEKESEKLIWEQMRTPTAGTPIAASSAQHRTLPKLLVLLILFVSVTYVVYTLKLVSTSRACNDAPFSTDTFSKSILAVNATASAAAALRRESRETNSEDRTELRHVVFGIAASAKLWEQRKSYIKLWYRARDMRGVVWLDEKVKSEEDSEALPPVRISGDTARFKYTNKQGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVTENLIRVLRKYNHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALYKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLASHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKLDSAGLMQQSICHDKSKSWTVSVSWGFAVQIFRGVFSPREMEMPSRTFLNWYRRADYTAYAFNTRPVSRNPCQKPFVFYFSKAKYNSTMQQIVSEYERHRVPHPDCKWKMANPAALDKVEVYKKPDPHLWDRAPRRNCCRVKKSKEKGTMVIEVGMCREGEVSET 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00472 514 Gene3D - 94 352 - -
Pumo6g00472 514 FunFam Fringe-related protein-like 94 349 - -
Pumo6g00472 514 PANTHER FRINGE-RELATED 31 511 - -
Pumo6g00472 514 Pfam Protein of unknown function, DUF604 235 488 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00472 Pumo-Chr6 5907190 5911652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00472 3 513 Glycosyltransferase AT4G23490 68.774 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00472 - - gmx:100818244 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00472 6 5907190 5911652 Pumo6g00472 6 5907190 5911652 ECH
Pumo8g02340 8 60646060 60650917 Pumo6g00472 6 5907190 5911652 PCT