Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02323 ATGGGACTCCTTGATCTGAAATGGACGTCAGGATGCATGGTTTTGGGGAAGGTAGAGTCATCTAAAGGGGGAGATAGTCGTTTTAACATGTCTTCCTTGCGCCGCAGTAGTTCAAACTATGATGGGTTTGTGTATAAAGAGAGAGGAAGAACAAGATGCAGACGAGGGCAAAGAGTAATAGTTGCTACAGGGCCAGCCATAGATCATGCTCCTGTTATTGCCAAGCCCTTGACAAAAGATGATCTAATTGACTACTTCCTATCTGGTTCCAAGCCCAAACAAAACTGGAGAATAGGTACAGAGCACGAGAAGTTTGGTTTTGAGTTTAAAACTTTACGTCCGATTAATTACAAACAGATATCAGCTTTACTCAATGGCATTGCTGCGATATTTGATTGGGAAAAAATAATGGAAGGTGACAACATCATAGGACTCAAAAATGCTAAAACTGTTGCAGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTTCAGCCTAAATGGAGACTGGAAGACATACCTGGAGTGCCTAAGGTACGGTATAACATTATGCAAAATCACTTACATAAATTTGGCTCACAAGCAATGTTCATGACTTGCTCGGTTCAGGTTAACCTGGACTTCAGCTCTGAAGCAGACATGATAAAGAAAATGCGTGCCAGTCTTGCTTTGCAGCCTTTAGCAGCAGCCTTATTCGCTAATTCACCTTTCGAGGAAGGGATTCCAAATGGTTACCTCAGCATAAGAAGGTCTATATTTAATTGTTTTGAATTATTGTTCACCTTAACACCCAAATATTTGTTTGAGCAGTATGTTGATTACGCTCTTGATGTGCCAATGTTGTTTGTTTATCGCAAAAACAAGTACATTGAATGCTGCGGCATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCCATGCCTGGTCAGGTGCCAACACTCGGTGACTGGGAAAATCATCTAACAACCATATTTCCTGAGGTCAGGCTAAAGAGATACATGGAAATGAGGGGTGCTGATTGTGGTCCTTTGGACATGTTATGCGCTCTGCCGGCTTTTTGGGTAGGTTTACTGTATAATGAGGTTTCACTACAAAATGTTCTAGATATGATTGCTGATTGGACTCCTGAAGACATACAAAATTTAAGGAATAAGGTTCCCATAACTGGTTTAAGGACTCCATTTCAAGGTAGATTGCTGCAACATATTGCAGAAGATGTGTTGAAGTGGGCAAAGGATGGCTTGGACAGAAGATGCTTAAATGAATCTATTTTCTTGGATCCAGTGAAGGAAGTAGTTGGAACAGGTTTGACCCAAGCCGACAAGCTATTGGAGATGTATAATAACAAGTGGGGAAACAACATAGATCCTGTGTTTAGAGAGTGCTGCTATTAA 1398 0.4127 MGLLDLKWTSGCMVLGKVESSKGGDSRFNMSSLRRSSSNYDGFVYKERGRTRCRRGQRVIVATGPAIDHAPVIAKPLTKDDLIDYFLSGSKPKQNWRIGTEHEKFGFEFKTLRPINYKQISALLNGIAAIFDWEKIMEGDNIIGLKNAKTVAEEMGIGFLGLGFQPKWRLEDIPGVPKVRYNIMQNHLHKFGSQAMFMTCSVQVNLDFSSEADMIKKMRASLALQPLAAALFANSPFEEGIPNGYLSIRRSIFNCFELLFTLTPKYLFEQYVDYALDVPMLFVYRKNKYIECCGMSFRDFMAGKLPAMPGQVPTLGDWENHLTTIFPEVRLKRYMEMRGADCGPLDMLCALPAFWVGLLYNEVSLQNVLDMIADWTPEDIQNLRNKVPITGLRTPFQGRLLQHIAEDVLKWAKDGLDRRCLNESIFLDPVKEVVGTGLTQADKLLEMYNNKWGNNIDPVFRECCY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02323 465 SUPERFAMILY Glutamine synthetase/guanido kinase 88 452 IPR014746 GO:0003824
Pumo8g02323 465 Gene3D - 62 148 - -
Pumo8g02323 465 Gene3D - 149 465 - -
Pumo8g02323 465 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 145 465 IPR035434 GO:0004357|GO:0006750
Pumo8g02323 465 Pfam Glutamate-cysteine ligase family 2(GCS2) 145 375 IPR006336 GO:0004357|GO:0042398
Pumo8g02323 465 PIRSF GCL 147 465 IPR035434 GO:0004357|GO:0006750
Pumo8g02323 465 PIRSF GCL 64 151 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02323 Pumo-Chr8 60463207 60467867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02323 K01919 - gmx:100775188 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02323 8 60463207 60467867 Pumo6g00502 6 6254727 6263184 PCT