Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00502 ATGGCTGTCGTTTCGCGAAGTGCCACGACCTATATGCGCCACCGCGACTTAATACGACACGAGTTCGATAGGAAGACGAAAACCTGCGTTGCCAACAGTTTGTGTTGCTCTTCCTGGGATTCTGCTAAGAAGGCTCCTCTACCTCCGCAGAGGATTGTCGGCTGTGTCGGGAGTACACGTGGCAGTAGAGTGGTTGTTGCTGCGAGTCCTCCCACTGAAGACGCTGTAGTTGCCACTGACCCACTCACGAAGCAGGATCTCGTCGATTATCTTGCCTCGGGTTGCAAGCCCAAGGAAAAATGGAGAATAGGTACTGAACATGAGAAGTTTGGTTTTGAGATTGGAAGCTTGCGTCCTATGAAGTATGAACAAATAGCAGAATTGCTGAATGGCATTGCTGAGAGATTTGACTGGGATAAAATAATGGAAGGTGATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCATTAGAGCCTGGTGGTCAGTTTGAACTTAGTGGAGCTCCTCTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCGCACCTTTATCAGGTTAAAGCTGTTGCCGAGGAAATGGGAATTGGATTTTTGGGGATTGGTTTCCAGCCAAAGTGGGGAATCAAAGACATACCTATAATGCCAAAGGGAAGATACGAAATTATGAGGAATTACATGCCTAAAGTTGGCTCTCTTGGGCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTGGACTTTAGTTCTGAAGCTGACATGGTCGGGAAATTTCGTGCAGGCCTTGCTTTGCAGCCTATAGCAACGGCTCTTTTTGCAAATTCACCCTTTAAAGAGGGAAAGCCAAATGGTTTTGTCAGTATGAGAAGCCATATTTGGACTGATACTGACAAGGACCGCACAGGCATGCTGCCTTTTGTTTTTGATGACTCTTTTGGGTTTGAGCAATACGTTGATTATGCTCTTGATGTTCCTATGTATTTTGTCTATCGGAAACAGAGATATATCGACTGTACTGGAAAGACCTTCAGGGACTTCTTGGCTGGAAGACTTCCTTGTATTCCTGGTGAATTACCAACTCTCAATGATTGGGAAAATCACTTGACAACTATATTTCCTGAGGTCAGGCTGAAGAGGTATTTGGAGATGAGAGGTGCTGATGGAGGGCCTTGGAGAAGGTTATGTGCTTTACCAGCATTTTGGGTAGGGCTATTGTACGATGAAGTTTCTCTACAAAGTGTTTTGGATATGACAGCTGATTGGACTCCAGAAGAAAGACAAATGTTAAGGAATAAGGTTCCCATAACTGGTCTGAAGACACCATTCCGAGATGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAGTTGGCAAAGGATGGCTTGGAGAGAAGAGGCTTCAAGGAATCGGGATTTTTGAATGAGGTTGCCGAGGTGGTTAGAGCAGGTAATGGATTTTTAGGTTATATACTCTCATTAACGATGCATCTCCCACGACCTTTCCATGCTTCCAGTGGCCATACTTCGTTTCATTCCCTTGCTCATTTCAGTTAG 1566 0.4464 MAVVSRSATTYMRHRDLIRHEFDRKTKTCVANSLCCSSWDSAKKAPLPPQRIVGCVGSTRGSRVVVAASPPTEDAVVATDPLTKQDLVDYLASGCKPKEKWRIGTEHEKFGFEIGSLRPMKYEQIAELLNGIAERFDWDKIMEGDKIIGLKQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWGIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMVGKFRAGLALQPIATALFANSPFKEGKPNGFVSMRSHIWTDTDKDRTGMLPFVFDDSFGFEQYVDYALDVPMYFVYRKQRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQSVLDMTADWTPEERQMLRNKVPITGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRAGNGFLGYILSLTMHLPRPFHASSGHTSFHSLAHFS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00502 521 NCBIfam glutamate--cysteine ligase 81 488 IPR011556 GO:0004357|GO:0006750
Pumo6g00502 521 FunFam Glutamate--cysteine ligase 67 498 - -
Pumo6g00502 521 SUPERFAMILY Glutamine synthetase/guanido kinase 93 489 IPR014746 GO:0003824
Pumo6g00502 521 Pfam Glutamate-cysteine ligase family 2(GCS2) 133 425 IPR006336 GO:0004357|GO:0042398
Pumo6g00502 521 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 50 488 IPR035434 GO:0004357|GO:0006750
Pumo6g00502 521 Gene3D - 67 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00502 Pumo-Chr6 6254727 6263184 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00502 K01919 - gmx:547545 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00502 6 6254727 6263184 Pumo6g00502 6 6254727 6263184 ECH
Pumo8g02323 8 60463207 60467867 Pumo6g00502 6 6254727 6263184 PCT