Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02297 ATGGCATTTCAGGAAAAGCAAAACAGGTTTAAGAAGCAGCCAGAGAAGAGTGCCTCTGCTTCAAACAATGGAAGAACTCCAGCTCCTATCAAATTCTCTAACGATACTGAAAGGCTTCAACATGTTAATAGCATACGCAAAGCCCCTGTTGGGGCTCAGATGAAGCGTGTTATTGATCTCCTATTTGAGACCCGAAAGGCTTTAACGATAGAGCAAATAAATGAAGCGTGTTACGTGGACATGAGAGCTAATAAAGATGTTTTTGAGAGTATGAGGAAAAACCCAAAAGTAAAATATGATGGGGAAAGATTCTCTTACAAGTCGAAGCATGATGTTAGGGACAAAAGTCAGCTGCTTTTCCTGGTACGTAAGTTTCCAGAGGGCATTGCTGTTGTTGACCTAAAAGATTCTTACCCAACTGTGATGGAAGACTTGCAGATGACTTGTGGTGAGAGTGGATTATTTTTAGAGGCTTTGAAAGCTGCAAGGGAGATTTGGCTGTTATCCAACTTTGACTCACAGGAGGACATTGCCTACCCGAATGATCCTAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTAGGGGGATTGAATTGCCTCGTGATATGATTGACATAGAGAGGGATCTACAAAAAAATGGAATGAAGCCTGCTACCAACACTGCAAAGAGGAGGAGTGCAGCGCAAATGGAAGGCATCTCATCCAAGCCTAAACCTAAGAAGAAGAAGAATGAAATCACTAAGAGGACCAAGCTGACTAATGCCCATCTTCCAGAGCTTTTTCAGAACTTAAAGTAA 807 0.4188 MAFQEKQNRFKKQPEKSASASNNGRTPAPIKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRKALTIEQINEACYVDMRANKDVFESMRKNPKVKYDGERFSYKSKHDVRDKSQLLFLVRKFPEGIAVVDLKDSYPTVMEDLQMTCGESGLFLEALKAAREIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRGIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQMEGISSKPKPKKKKNEITKRTKLTNAHLPELFQNLK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02297 268 MobiDBLite consensus disorder prediction 1 32 - -
Pumo8g02297 268 Pfam TFIIE beta subunit core domain 52 112 IPR003166 GO:0006367
Pumo8g02297 268 MobiDBLite consensus disorder prediction 218 268 - -
Pumo8g02297 268 MobiDBLite consensus disorder prediction 14 30 - -
Pumo8g02297 268 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 38 113 IPR003166 GO:0006367
Pumo8g02297 268 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 9 268 IPR016656 GO:0005673|GO:0006367
Pumo8g02297 268 Pfam TFA2 Winged helix domain 2 113 146 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02297 Pumo-Chr8 60192375 60195594 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02297 K03137 - gmx:100788089 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02297 8 60192375 60195594 Pumo6g00523 6 6518533 6521576 PCT