Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00523 ATGGCGTTGCAGGAGAGGCTAGACAAGTTCAAGAAGCAGCAGGAGAAGTGCCAGACGACACTGTCGAGCATTGCAGCAAGCAAGGCCGCAGCAAGTCAAAAATCCGCCGCACATGGCGCGGCCTCGGCCAATGGAAGAAGCGCGGCTCCTGCGGTTAAGTTTTCGAACGACACGGAGAGGCTTCAGCATATTAATAGCATTCGCAAAGCCCCCGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTTCTAGAGACACGACAAGCTTTGACACCTGAGCAGATAAATGAGGCATGCTATGTCGACATGAAGGCTAACAAAGATGTCTTTGAGAATCTGAGGAAAAACCCGAAAGTGAACTATGATGGGCAACGATTCTCTTACAAGTCAAAGTATGGTCTTAAGGACAAAACTGAGCTTCTTCAACTGATACGAAAGTATCCTGAGGGCCTTGCTGTTATTGACCTAAAGGACTGCTTACCCCACTGTGATGGAAGACTTGCAGGCTTTGAAAGCTGCAGGGCAGATTTGGCTGCTGTCCAACTTTGA 549 0.49 MALQERLDKFKKQQEKCQTTLSSIAASKAAASQKSAAHGAASANGRSAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDCLPHCDGRLAGFESCRADLAAVQL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00523 182 Pfam TFIIE beta subunit core domain 74 132 IPR003166 GO:0006367
Pumo6g00523 182 Pfam TFA2 Winged helix domain 2 135 167 IPR040501 -
Pumo6g00523 182 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 169 IPR016656 GO:0005673|GO:0006367
Pumo6g00523 182 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 60 135 IPR003166 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00523 Pumo-Chr6 6518533 6521576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00523 K03137 - gmx:100793998 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00523 6 6518533 6521576 Pumo6g00523 6 6518533 6521576 ECH
Pumo8g02297 8 60192375 60195594 Pumo6g00523 6 6518533 6521576 PCT