Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02295 ATGGGAACACCCCGAGACGAGAAGTCCGAAGCAACCAATAGACATATCAGCAGTAGCTCAAAATGCAATTCTAAACAGGCTCTAGAGAAATCAAATGAACGTCCTGAATGGTTACCTGATGGCTGGAATGTGGACTTCAGAACTAGAAACAGTGGGGCAAATATGGGATATGGGTATAAGTGTTACATTGATCCAAGTGGACACAAATTCTACTCCAAACCAGAGGTGTTACGATATCTTGAGACTGTAAACAGCAACAGCCACACTTCCAAGAAGGAAAAGATATGCAAAAGCAATGATACAGTTAAGAAGTCCACCGTAGAGGATTTAGCACCTGAGCAGATAACAGAAGTCAAGATTAGGAAGGGCAGTAATGGCAATAGGGTAGATCCGGATGTGGTCGAGAAGTCTCCAGTGGAGGATATACCACCTGGGTGGATAACAGAAGTCAAGGTTAGGAAGGGTGGTACTGGCAATAAGAAAGATATGTTATATATAGATCCAGTGAGTGGATATGTATTTCGCTCCAAGAAGGATGCACTGCGCTATGTTAAGTCTGGAGATATAAGTACGTGTGTGCTTAAACCATATAAAAGACAAATCCAAGATGAAGACAAAATAACTGATGCAGTTGAGAAGTCCACAGTAGAGGATTTACCACCTCGGCAGATAACAGAAGTCAAGATTAGGAAGGGCAATAATGGCAACAGGGTAGATTCGGATGTGGTCAAGTTTCCAGTGGAGGATTTACCACCTGGGTGGATAACAGAAGCCAAGGTTAGGAAGGGTGGTACTGGCAATAGGAAAGATATGTTTTATATAGATCCAGTGAGTGAATATGTGTTTCGCTCCAAGAAGGATGCACTGCGCTATGTTAAGTCTGGAGATATAAGTACGTGTGTGCTTAATCCATATAAAAGGAAAATCCAAGTTGAAGACAAAATAACTCCATCATCTACTGGCAAGAAACAGAAACTAAAGCAGTCTGCAACAAAACGGCAACTTTTTGTAGGCCAAGAAATATATAATGAAAGTGCTTTAGAATTGCCAGATGCTAATGACTCGAAAAAAGGGCAAGATGTGACAGATTATTCTGAAATGACTGTTGCTCCTGTTCTCCCGGGTGAACCCGTTGTCAAGAATCAATCATTAGAGAATGCAGCTGCACTCACTCCTGAAATGAAGAAAACATCTGATTCAGATGATGTGCAAGAGAAGAATCATGTTGTGAATATGTTGGAGCATGCTAGTAAAAAGAACCACAGCAACCCTAGTTTATCCAAAACCAAGGGGTCCAATGTTGCTCGCCGTTTTTCACGGAGACTTTCTGGGGCAGAACCTGACCAGTTAACCAATGTAGCTAATGAACAGGCTCTTCAAGTTCCTAAGAGAAACTTGAGAAAAAGTAGAAGTGTTTTAGACACTGACTTGACAAATAAATCATCTCAGCAGCTGAATGGTGTCCTAGAAATTGAGCTTTTGCATGAAAAGCAAGGAGAGGTACTATTGAACACAAACAAATCCAGCAACAAGAAAGAGCATCAGATTCTTTGTCATGCTTCGAAACAATTAGCTGGATTTGAACCTGAGGTGATGAGCTACTCCATCTCCAACGAAAGAGCTCCCAAATATAAAAGTAAAAAGTCTAAAGGTGAGGTCAATGCAACCTTGCAGCAAAGTGATGATCAACCAACTATGGAGCTTGCAGACCATGCATCAATAAATGGAGAGTCATCAAATAAAGGCAGAAAACTTCCTGAAACCACACCCATAACCATCAATCAACTGAAGAAATTTGATGATGATGAAATGAATAATGATGAGAAATCGGAACCTGAGCAATCCTTTGCATTTCACTATTCTTGGTCTGACCCATGCTTGGAATTTGCAATTCAGACCCTCACAGGTGCATTGCCAGTTGAGGATTCAGTTGATAATGGACATGCTAGGATTTCTGAAACTGATATATCTCCCAAAAATAAGTTGGCTGAGAATGTTACAGGAAGCAGCAGTGACAAAAACTCGCGTGTAAATTCAAAGGAATCCAAGAACAAGAAAGAGCTTACAATGCCTAGGCGGTTGTCAAAGCGACTTGCTGGCCATGAACCTGAGGTACTGCCAACTGAAAAAGCTATTGAATATGCCACTAGAAAATTGTGCAATGACAAACCAGCTGCTACTGCGATTTTAACTAATGGAGTGTCTGGGCATCTTCATGCCAGGGAAGAATCCAAGCTTCTTGTGCAGGCATCTGACAGGTTGAAAACATTATGTGGTGAATCATCAAGCAAGAGTGAGAAGTCCTATGATCCCCAAATTGTTCCCAATGAACAACTGCGGAGGCTTGAAGCTGAAAATGTTGATGATGACAGATCAGATCCACAGTTCCCCACACCTTTTGGGGACTACTGGTCAGATCCATGCTTAGAATTTGCAATTAAGACTTTTTCTGGTGCTTTGCCAGTTGATGGTCCCACTGCCACCGCTGCTGCTGGCATTTTGCCTGTTATGACTCCTGATGCTAATGACCCGCCAAATAAGGAATTACTTGATAACCCCAACCAATCCCAGACCAAGAAAGAGTTTAGTACTGTGTGCCAGCCATCGAAACAAATCCTGGACCAGCCTGAGTTGATGACCTACTCCGCATCCTGTGGAAATGATCCTAAATTTGCAACTAGAGAGTCTTACAAGGATGAAGACAGTATAACCAGGAATTTTAATGGAAGAGAATCCCAACGTATTGAAGCCAGGAACGCAAGAGAAATTGATATAAACAAAACAATACTTGAAGAAGAGCCACAACCTGAAACAATAAACCATGATAATTCTGATAGAGCATTTTGTGTTCCATTTATGGATTCTTGGTCAGATCCATGCCTAGAATTTGCATTTAAGACTCTTACAGGCGCAATACCAGTAGAGGAAAATAAAGCAATTCAAGGAAGTTTCCTGGAACCTGCGAATCGCCATGACCAGAGAGGTGGTGGCTCGATGGTGCCGGAATTTGGATTTTCAAGCATTTCTCATAGTGGTATCTCATTTCACAATGATATAGGGCAGAAGTCCAAGCCAGGGCAGCAGTCATCATCGAGTTCTTCTCTCCTCTCCCAGGAAAAACCGAGCCCACATGGTTTCTCGGGGGTTGCTCCTCAAAAATAA 3162 0.4197 MGTPRDEKSEATNRHISSSSKCNSKQALEKSNERPEWLPDGWNVDFRTRNSGANMGYGYKCYIDPSGHKFYSKPEVLRYLETVNSNSHTSKKEKICKSNDTVKKSTVEDLAPEQITEVKIRKGSNGNRVDPDVVEKSPVEDIPPGWITEVKVRKGGTGNKKDMLYIDPVSGYVFRSKKDALRYVKSGDISTCVLKPYKRQIQDEDKITDAVEKSTVEDLPPRQITEVKIRKGNNGNRVDSDVVKFPVEDLPPGWITEAKVRKGGTGNRKDMFYIDPVSEYVFRSKKDALRYVKSGDISTCVLNPYKRKIQVEDKITPSSTGKKQKLKQSATKRQLFVGQEIYNESALELPDANDSKKGQDVTDYSEMTVAPVLPGEPVVKNQSLENAAALTPEMKKTSDSDDVQEKNHVVNMLEHASKKNHSNPSLSKTKGSNVARRFSRRLSGAEPDQLTNVANEQALQVPKRNLRKSRSVLDTDLTNKSSQQLNGVLEIELLHEKQGEVLLNTNKSSNKKEHQILCHASKQLAGFEPEVMSYSISNERAPKYKSKKSKGEVNATLQQSDDQPTMELADHASINGESSNKGRKLPETTPITINQLKKFDDDEMNNDEKSEPEQSFAFHYSWSDPCLEFAIQTLTGALPVEDSVDNGHARISETDISPKNKLAENVTGSSSDKNSRVNSKESKNKKELTMPRRLSKRLAGHEPEVLPTEKAIEYATRKLCNDKPAATAILTNGVSGHLHAREESKLLVQASDRLKTLCGESSSKSEKSYDPQIVPNEQLRRLEAENVDDDRSDPQFPTPFGDYWSDPCLEFAIKTFSGALPVDGPTATAAAGILPVMTPDANDPPNKELLDNPNQSQTKKEFSTVCQPSKQILDQPELMTYSASCGNDPKFATRESYKDEDSITRNFNGRESQRIEARNAREIDINKTILEEEPQPETINHDNSDRAFCVPFMDSWSDPCLEFAFKTLTGAIPVEENKAIQGSFLEPANRHDQRGGGSMVPEFGFSSISHSGISFHNDIGQKSKPGQQSSSSSSLLSQEKPSPHGFSGVAPQK 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 1004 1041 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 1 42 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 596 612 - -
Pumo8g02295 1053 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 132 204 IPR001739 GO:0003677
Pumo8g02295 1053 Gene3D - 221 335 - -
Pumo8g02295 1053 Gene3D - 1 123 - -
Pumo8g02295 1053 SUPERFAMILY DNA-binding domain 33 103 IPR016177 GO:0003677
Pumo8g02295 1053 Pfam Methyl-CpG binding domain 142 187 IPR001739 GO:0003677
Pumo8g02295 1053 Pfam Methyl-CpG binding domain 250 295 IPR001739 GO:0003677
Pumo8g02295 1053 Pfam Methyl-CpG binding domain 30 85 IPR001739 GO:0003677
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 542 612 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 758 777 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 758 772 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 651 702 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 551 595 - -
Pumo8g02295 1053 SUPERFAMILY DNA-binding domain 141 192 IPR016177 GO:0003677
Pumo8g02295 1053 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 240 312 IPR001739 GO:0003677
Pumo8g02295 1053 PANTHER OS04G0193200 PROTEIN 665 1038 IPR038945 -
Pumo8g02295 1053 Gene3D - 138 195 - -
Pumo8g02295 1053 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 106 IPR001739 GO:0003677
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 983 1053 - -
Pumo8g02295 1053 SUPERFAMILY DNA-binding domain 236 304 IPR016177 GO:0003677
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 676 702 - -
Pumo8g02295 1053 MobiDBLite consensus disorder prediction 658 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02295 Pumo-Chr8 60177843 60188900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02295 - - vra:106777576 1424.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02295 8 60177843 60188900 Pumo6g00525 6 6527022 6537338 PCT