Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00525 ATGGATTCTCCAAACGACAACAGTCGCACTCCCAAGAATGAGAAGAATCGCAGTAACATGGGTTCTCCAAACGGCAATAGTTGCACTCCCAGGAAGGAGAAGAATTGCAGTAACATGGATTCTCCAAACGACAACAGTTTCACTCCCAAGAAGGAGAAGAATTGCAGTAACATGGATTCTCCAAACGAAAACAATTGCACTCCCAAGACGGAGAAGAATTGCAGTAACATGGATTCTTCAACTGATGTTGTGGTTGAGAAGTCTACTGTGGAGGATTTACCACCTGGATGGGTAAAAGAATTAAAGATTAGGAAGAAGAACAAGGGCATTCGGAAAGATCCGTTTTATATAGATCCAGTGAGTGGATATGTATTCCGTTCTAAGAAGGATGTACTGCGGTATCTTGAATCCGGTGATATACGTTCATGTGCATTTAAGCCAAGTAGAAGACAAATCCAAGATGAAGACAACTTAACTCCACCACCTGCTGCCAAGAGACAGAAACTGAAGCAGTCTGCATCTGAACAACAGCTTTCTGCAGCCACAGAAATACTTGATAAAAGCAACTTAGAATTGCTAGATGCTAACAGCTCAAGGAAAGGGCAAAATGAAAATGTGTCATCTGGAACAATGGTTGCTTCTGTTCCCATGGGTGAATCTGTTGTAAAGATGCATTCACTAGAGGATGGAGCTGCAAACTCTTCTGAAGTGAAGAAAACAACTGACCCAGGTAGCTCAGCACTTTTGAATGAATCCTTGAAAGAATCAGAACAAGTACTTTCTGCAGATGATGTGCAAAAGAAGGAGCATGTTGTGAATATGATGGAGAATGCTAATGAAAAGAATCACAGTAATCATAGCATTTCCAAAAACAGGAAGGGGTTCAATGTACCTCACCGGTCATCCCCAAGACTTGCTGGAAGTAAACCTGTCCAGTTGCCCAACAATGTGATCAATGAACAGACTCTTCAGGTTCCAAAAAGAAACTTGAGGAAAAGTAGAAACACTCTAGATGTTGATATTTCTGAAGACCAAACAGTTTCTAAAGAGCAACGACATCAGCAAGAAACAGATAAAATAAAAGACAATAAGCCAGAAATTCAAATTAGCTCAAACAAATCAAGTAAAAAGAAAGAGCACCACCTTCCTCGTCGGACTTCAAAACGATTAGCTGCAATTGAACATGAGTCAATGAACTCCAAAGCAGAATTGCAGCAAAGTGAGTGTGAGCCAGTTACAGTGCTTGCAGATCAAGCACCAATAAATGGAAAGTCAGCAAATAAAAGGAAAAAATCAGAACCTCAGCTGGGGAAACCTGAAAATGAAGAAATGGATGATGAGAAATCAGAACCTCAGCTGTCCTTTGCATTTCACTACTCTTGGTCTGACCCAAGCTTGGAATATGCAATCAATACCCTCACCGGTGTGTTACCACCAGTTGATAATATACCCACTACAGTCCCTGAAACTGATATTCAAAAAACTTTGGTTGATAATGTTATGGGAAAAAGCACCGCTACTACAGTCCCTGAAACTGATATTCAAAAAACTTTGGTGGACAATGTTACAGGAAGAAGCACCGTTATAGTCCCTGAAACTGATATTCAGAAAACTTTGGTTGACAATGTTACAGGAAAAAATGCCACTACAGTCCCTGAAACTGATATTCAAAAAACTTCGGTTGACAATGTTATGGGAAGAAGTGCCACTACGATCCCTGAAACTGATGATCCAAAATCTTTGGTTGACAATGTTACGGGAAGAAGCACCGCCATAGATCCTGAAACTGATATTCAAAAAACTTTGATTGTCAATGATACAGGAAGAAGCAAGGACAGTGAAAACAATTTGCTTGATGCTGTTACAGGAAGCAGGGATGGAAAATCCCAGGTACATTCAAATAAACCCAAGAGAAAGAAAGAGATCAAAGTACCTATGCGGTTATCAAAGCGACTTGCTGGCCTTGAACCCGAGGTACCGCCTGCTGAAAGAGCTATTGAATATTCCACTAGAAAATCATGCAAAGAAGATCCAACTGCAACTGCTACTTTAACTAATGGAGTGTCTGACCATCACGATGCTGGGGAAGAAACCAAGGTTAGTCTTCAAGATTCTGACAGTTCGAAAACAGAAGTACTAGGAGAATCATTAAACCAGAGTGAGAAGTCATATGATGCCCAAACTGGTCACAAGGAACAATTGCAGAAAGTTGAAGCTGAAAATATTGGTGATGCAACATCAGAGCCACAACTCCCATTGCTGTTTGGGGACTCTTGGTCAGATCCATGCCTAGAATTTGCAATCAAGACTCTCACTGGTGCTTTACCAGTTGATGCTGGTGCAGACATTATGCCTGCCTTGCCTCCTGGCTTTGATAATCCACCATATAAGCAATCGCATGGGAGTGTGATGACAAGCATTAATCAAGAAGCTCGTGATAACTCAAACCAATCCCAGAACAAAAAAGAGCTTAATATGGTTAGCCAACCTGAGTTGAGGACCGGCTCCATCTCTTATGAAAATGCTCCCAAATTTCCAACTAGAGAGTCTTGTCTTGATCAAGGCAATATAATAAGGAATTTGGATGGAGAACCTCGTCACACTGGAAACATAACACAACCAGTCCATCATTCTAGGAATATAAACACACTAACACATGAAGAGCCATTAAAGCAAAATGGACAGGTTGTCGAGGGTGGATTTGTTACAACGGAGCAACAACTATTTGAAACTGGAACTGTAAACCATGATAACTCTGAATTACAGTATTGTGCTCCGTTTATGAATTCTTGGTCAGACCCATGCCTAGAATTTGCAGTTAAGACTCTTACAGGCGTGATACCAGTAGAGGAAAATTTAACACTTCAAGGATGTTTCCAGGAACCTGTTAACTATCATGAACAAAGGGACGGTGGCTCAATGTTGCCAGATTTTGGATCTTCCAGCTTTTCTCAAAGTGATTTCTCTTTTCTCCATGATACAGGGGTTAAGTCCATGCCGGGGCAGCACTCATCAATGAGCTCTTCATTCCTACCGTTGGAAAAAACGAGCCTGCAAGGTTTCGCTGGAGTTGATCCTCAAACACAGTTTTCTCAGTGCAACAATAATTTTCAAAGAAGGGACTGGGCGAAGAACATGAAGAAAGCAAAGGACTTGATTTAA 3162 0.4105 MDSPNDNSRTPKNEKNRSNMGSPNGNSCTPRKEKNCSNMDSPNDNSFTPKKEKNCSNMDSPNENNCTPKTEKNCSNMDSSTDVVVEKSTVEDLPPGWVKELKIRKKNKGIRKDPFYIDPVSGYVFRSKKDVLRYLESGDIRSCAFKPSRRQIQDEDNLTPPPAAKRQKLKQSASEQQLSAATEILDKSNLELLDANSSRKGQNENVSSGTMVASVPMGESVVKMHSLEDGAANSSEVKKTTDPGSSALLNESLKESEQVLSADDVQKKEHVVNMMENANEKNHSNHSISKNRKGFNVPHRSSPRLAGSKPVQLPNNVINEQTLQVPKRNLRKSRNTLDVDISEDQTVSKEQRHQQETDKIKDNKPEIQISSNKSSKKKEHHLPRRTSKRLAAIEHESMNSKAELQQSECEPVTVLADQAPINGKSANKRKKSEPQLGKPENEEMDDEKSEPQLSFAFHYSWSDPSLEYAINTLTGVLPPVDNIPTTVPETDIQKTLVDNVMGKSTATTVPETDIQKTLVDNVTGRSTVIVPETDIQKTLVDNVTGKNATTVPETDIQKTSVDNVMGRSATTIPETDDPKSLVDNVTGRSTAIDPETDIQKTLIVNDTGRSKDSENNLLDAVTGSRDGKSQVHSNKPKRKKEIKVPMRLSKRLAGLEPEVPPAERAIEYSTRKSCKEDPTATATLTNGVSDHHDAGEETKVSLQDSDSSKTEVLGESLNQSEKSYDAQTGHKEQLQKVEAENIGDATSEPQLPLLFGDSWSDPCLEFAIKTLTGALPVDAGADIMPALPPGFDNPPYKQSHGSVMTSINQEARDNSNQSQNKKELNMVSQPELRTGSISYENAPKFPTRESCLDQGNIIRNLDGEPRHTGNITQPVHHSRNINTLTHEEPLKQNGQVVEGGFVTTEQQLFETGTVNHDNSELQYCAPFMNSWSDPCLEFAVKTLTGVIPVEENLTLQGCFQEPVNYHEQRDGGSMLPDFGSSSFSQSDFSFLHDTGVKSMPGQHSSMSSSFLPLEKTSLQGFAGVDPQTQFSQCNNNFQRRDWAKNMKKAKDLI 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 308 330 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 705 724 - -
Pumo6g00525 1053 SUPERFAMILY DNA-binding domain 91 142 IPR016177 GO:0003677
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 663 732 - -
Pumo6g00525 1053 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 83 150 IPR001739 GO:0003677
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 424 450 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 14 82 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 690 704 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 606 629 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 418 450 - -
Pumo6g00525 1053 Coils Coil 390 410 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 277 296 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 331 376 - -
Pumo6g00525 1053 CDD MBD 93 137 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 277 390 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 606 640 - -
Pumo6g00525 1053 PANTHER OS04G0193200 PROTEIN 579 1034 IPR038945 -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 1 82 - -
Pumo6g00525 1053 MobiDBLite consensus disorder prediction 146 174 - -
Pumo6g00525 1053 Gene3D - 56 183 - -
Pumo6g00525 1053 Pfam Methyl-CpG binding domain 93 139 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00525 Pumo-Chr6 6527022 6537338 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo6g00525 - - gmx:100782433 1741.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00525 6 6527022 6537338 Pumo6g00525 6 6527022 6537338 ECH
Pumo8g02295 8 60177843 60188900 Pumo6g00525 6 6527022 6537338 PCT