Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02267 ATGTACCATTTTTATAATCACCGTCGTGTTCACTTGTCCAAAAAAGACAGAAAAGAAAAAAGAAGGGAAAGTTGTCCACTCCCTCCCTGTGTATATATAAAAGAGACGAGAGGAGAAGAAGCCGAGATTGTATTGGGTGAGAAAAAGAGAGAGAGGATGGGTGCAGAAGCAAATGGCGGCGAGAAGCAATTGAAATTTCTGATCTACGGTCTCACCGGTTGGATTGGTGGTCTATTGGGTAAGCTCTGCGAAGAGCGCGGGATCCAATATGAGTACGGCACCGGCAGATTGGAGAACCGGTTGTCGTTGGAAGCAGACATAACGGCGGTGAAGCCCAGCCACGTGTTCAACGCTGCGGGAGTGACAGGTAGACCCAATGTGGACTGGTGCGAATCTCACAAAGTTGAAACCATCCGAACCAACGTGGTCGGCACTCTCACCCTCGCCGACATCTGCCGCCAAAAAGGCCTCATCCTCATCAACTACGCCACCGGCTGCATCTTCGAGTACGATTCATCCCACACTCTCGGATCCGGCCTCGGCTTCAAGGAAGACGACACTCCCAATTTCACCGGATCCTTCTACTCCAAGACCAAAGCCTTGGTGGAGGATCTGCTTGGGAACTACGAGAATGTGTGCACGTTGCGTGTCAGGATGCCGATTTCCTCGGATTTGTCGAACCCGCGGAATTTCATCACTAAGATCACTCGATACGACAAGGTTGTCGACATTCCCAACTCCATGACCATACTGGACGAGCTCCTCCCAATCTCGCTGGAGATGGCGAAGAGGAATCTCACCGGGATCTGGAATTTCACGAACCCTGGAGTGGTAAGCCACAACGAGATTTTACAGATGTACAAGGAATATGTGGATCCGAACTTTACCTGGAAGAACTTCACTTTGGAGGAGCAGGCTAAGGTGATTGTTGCCCCTAGAAGCAACAACGAGCTTGACGCCTCTAAGTTGAAGAAGGAGTTTCCTGAACTTTTGTCTATCAAGGACTCCCTCGTTAAGTATGTTTTCCAGCCCAATCAGAAAAAGGCATAG 1050 0.4962 MYHFYNHRRVHLSKKDRKEKRRESCPLPPCVYIKETRGEEAEIVLGEKKRERMGAEANGGEKQLKFLIYGLTGWIGGLLGKLCEERGIQYEYGTGRLENRLSLEADITAVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADICRQKGLILINYATGCIFEYDSSHTLGSGLGFKEDDTPNFTGSFYSKTKALVEDLLGNYENVCTLRVRMPISSDLSNPRNFITKITRYDKVVDIPNSMTILDELLPISLEMAKRNLTGIWNFTNPGVVSHNEILQMYKEYVDPNFTWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELLSIKDSLVKYVFQPNQKKA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02267 349 CDD dTDP_HR_like_SDR_e 65 337 - -
Pumo8g02267 349 Pfam RmlD substrate binding domain 65 236 IPR029903 -
Pumo8g02267 349 Gene3D - 55 349 - -
Pumo8g02267 349 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 55 349 - -
Pumo8g02267 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 63 341 IPR036291 -
Pumo8g02267 349 PANTHER DTDP-4-DEHYDRORHAMNOSE REDUCTASE 63 347 IPR005913 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02267 Pumo-Chr8 59834153 59835675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02267 K12451 - gmx:100787499 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02267 8 59834153 59835675 Pumo8g02267 8 59834153 59835675 ECH
Pumo4g01578 4 19950652 19952567 Pumo8g02267 8 59834153 59835675 PCT