Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02216 ATGCGAGTGAAAGAGATGCACCCGCTGTGCTGTATCTCCCTCGAGAGTCCCGGAATCGGCAAGCATTCGCCGGAGCGCGAGCCGGCGGGGCTTTTCCGAACCAAGAGCCTCCCGGCGGCGGGATCTCACGGCAATGCCGCTAAGGGATCGGAGACCACCGTCGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGCTGGTTCCTCTTGCGGAATGGCGTTCTCTCCTACGCCAAGATCCGCTGTCCGGAGAATCTCAACCTCCTCACTCCTTCCGACGACGTTCGCCTCATCGGAGAGATTTCCACCAACCGTCTCGCACGAGTGGACCGCGCCGCCACCGTCACGCGACGGAAGCACCGCAAAGCTTCTTCTTCTTCCGGCGTAGTCCATCTCAAGCAGATTTCGTCATTTAGAGAGAGCAAGTCAGATGATCGGCGTTTCTATATATTTACAGCAACGAAAACTCTCCATCTGAGAACTGATTCGAGGAAAGATCGGGTGGCGTGGATACAAGCCTTGGTTTCAACACGTGGCCTGTATCCTCTTCAACCACTCAATGATCACCTCTTGCTTGCACCCAATGACATATCCGTGTCAACCGAGAGGCTTAAGACACGCTTGCTTGAAGAGGGTACCAGTGAGAACCTTGTAACGGAGTGCGAGCAGATCATGCTCTCAGAGTTCTCTGAAATGCAAGGACAACTTGAAGTTCTTTGTCAGGAGCGATCTAATCTGCTTGATACAATAAGGCAGTTGGAGGCAGCTAATACTGAACCTGAGGCGTCTGCAATACACGATGGTGATTACCAATTGTCAAAGAATGAGTTTTCAAGTCTTGGACGTGGAAAGTATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAAAAACAAGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGATACTAGAGAGTGTTTTACAGAGCCTGATTGCAAGTGTGAGTCAGCAGGAGCTATGAATCAGGTGGACAGGTGTAGGGAAGCCAACACACAATGCACTGATACAGAGAACAATCATCCTGAGAAAATGGTCTGTAATTATAAGCACCCTCAGATAGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGATAATGTGGGAAAAGATCTCACGAGAGTTTGTCTCCCTGTATACTTTAATGAGCCAATATCATCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTGGATCAAGCTTATGAGCACGGAAAATCAGGAAACGGTCTCCTTCGGGCACTGTATGTTGCTGCCTTTGCAGTTTCCGGATATGCGTCATCTGAAGGTCGTCATTGTAAACCCTTTAATCCTTTATTAGGAGAAACCTACGAAGCTGATTACCCCGACGAAGGAATTCGCTTCTTTTCCGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGCGAAGGTAGAGGATGGAAGTTTTGGGCTGATAGCAACATCCATTCAAAGTTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTAGAGTTCAATGATGGTGAAATATTTCAGTGGAGTAAGGTCACCACCTCGATCTATAATCTCATCCTTGGAAAAATATACTGTGATCATCATGGGAACATGGATATACGTGGTAATCGTAGTCATTCATGCAGACTCAAGTTCAAAGAGCAGACGATCCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTCGAAGATGTAACGGGGAAAAAAGTTGCCACATTATTTGGCAAGTGGGATGACAGCATGTATTATATGAATGGTAATGTAAATGTTAAGCCTAAAGATTTCACTTCATCAAACGCATCCTTGTTGTGGAAAAGGAGTATGCCATCTCCTAATCTCAACCGGTATAATTTGACACCATTTGCCATCACTCTGAATGAGCTTACTCCGGGACTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTCAGACCAGATCAAAGGCATCTAGAGAATGGGGAATACGAAACGGCTAATTTGGAGAAACAAAGGTTGGAAAAGCGGCAGAGAATGTCAAGGAAAATACAAGAAAGTGGTTGGAAGCCTAGGTGGTTCCGAAGAGAAGGTGAAAATGGAACATTTCGATACGTTGGTGGGTATTGGGAAGCGAGAGAGCTTGGAAGATGGGACGGGTGCCCTAATATATTTGGTGAATTCAATGAAGACTCTGCCGAGCCGTTAGGTGCATTTTAA 2304 0.4679 MRVKEMHPLCCISLESPGIGKHSPEREPAGLFRTKSLPAAGSHGNAAKGSETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPSDDVRLIGEISTNRLARVDRAATVTRRKHRKASSSSGVVHLKQISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRGLYPLQPLNDHLLLAPNDISVSTERLKTRLLEEGTSENLVTECEQIMLSEFSEMQGQLEVLCQERSNLLDTIRQLEAANTEPEASAIHDGDYQLSKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRECFTEPDCKCESAGAMNQVDRCREANTQCTDTENNHPEKMVCNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDQAYEHGKSGNGLLRALYVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDEGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFWGRSIQLDPVGVLTLEFNDGEIFQWSKVTTSIYNLILGKIYCDHHGNMDIRGNRSHSCRLKFKEQTILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYMNGNVNVKPKDFTSSNASLLWKRSMPSPNLNRYNLTPFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYETANLEKQRLEKRQRMSRKIQESGWKPRWFRREGENGTFRYVGGYWEARELGRWDGCPNIFGEFNEDSAEPLGAF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02216 767 Gene3D - 47 184 IPR011993 -
Pumo8g02216 767 Pfam Pleckstrin homology domain 56 179 - -
Pumo8g02216 767 Gene3D - 474 644 - -
Pumo8g02216 767 ProSiteProfiles PH domain profile. 51 184 IPR001849 -
Pumo8g02216 767 Gene3D - 684 741 - -
Pumo8g02216 767 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 645 - -
Pumo8g02216 767 SUPERFAMILY Oxysterol-binding protein-like 383 756 IPR037239 -
Pumo8g02216 767 SMART PH_update 52 186 IPR001849 -
Pumo8g02216 767 SUPERFAMILY PH domain-like 51 181 - -
Pumo8g02216 767 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 741 IPR000648 GO:0008289
Pumo8g02216 767 FunFam Oxysterol-binding protein-related protein 2A 684 755 - -
Pumo8g02216 767 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Pumo8g02216 767 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02216 Pumo-Chr8 59224941 59235457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02216 K20456 - gmx:100819924 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02216 8 59224941 59235457 Pumo8g02216 8 59224941 59235457 ECH
Pumo8g02216 8 59224941 59235457 Pumo4g01642 4 20831309 20841876 PCT