Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g02211 ATGGCAAGGAGCTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATACCCAGACAGGATTCCGGTAATTGTGGAGAAGGCCGAAAGAAGTGACATCCCAAGTATTGACAAGAAAAAGTACCTTGTCCCTGCTGACTTGACTGTAGGACAGTTTGTCTACGTGATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGACAACGTCCTTCCTCCTACAGGAGCAATTATGTCTGCCATATATGATGAGAAGAAGGACGAGGATGGCTTTCTCTATGTTACATACAGTGGCGAGAACACATTTGGGGATCTGGTTTCCATTCAGTAG 372 0.4328 MARSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLVSIQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g02211 123 SUPERFAMILY Ubiquitin-like 4 117 IPR029071 -
Pumo8g02211 123 CDD Ubl_ATG8 12 114 - -
Pumo8g02211 123 Gene3D - 1 117 - -
Pumo8g02211 123 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Pumo8g02211 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 3 117 IPR004241 -
Pumo8g02211 123 FunFam Autophagy-related protein 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g02211 Pumo-Chr8 59161718 59165103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g02211 K08341 - gmx:100781703 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02211 8 59161718 59165103 Pumo8g02211 8 59161718 59165103 ECH
Pumo8g02211 8 59161718 59165103 Pumo4g01662 4 21090228 21091913 PCT
Pumo4g01666 4 21118857 21123556 Pumo8g02211 8 59161718 59165103 PCT