Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01666 ATGAGCACTGGGGACCTTCTCAGCATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACCGATAGCTATGTAGCCTTCAAGGTGAAAACAACCAATCCGAAGAAGTATTGTGTTCGTCCGAACACCGGAATTGTCACGCCACGATCTACGTGTGATGTTATCGTTACCATGCAAGCGCAAAAAGAGGCTCCTGCTGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACTGTTGATGGTGCCAGTCCGAAGGATATCTCTGCAGAAATGTTCAACAAGGAGGCAGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGCTGTATGTTTCTCCACCTCAACCACCGTCTCCAGTCCCAGAAGGTTCTGAGGAAGGATCCTCACCTAGAGGTTCTGTTTCAGAGAATGGAAATGCCAATGGTTCTGACTTCACACAAGTAGCAAGAGGATTTACTGAAAGACCTGAGGCTCAAGACAAATCTGTAGAGGCTAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAGTCCAACAAAATAGCAAGCTCCGCCAGGAACTGGAGCTACTGAAGCGGGAAGGCAACAAAAGTCGCGGTGGAGTCTCATTTGTCATTGTCGTATTAATTGGCTTGCTTGGCGTAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4587 MSTGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVTPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVKTVDGASPKDISAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFTQVARGFTERPEAQDKSVEARALISRLTEEKNNAVQQNSKLRQELELLKREGNKSRGGVSFVIVVLIGLLGVIMGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01666 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Pumo4g01666 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Pumo4g01666 241 MobiDBLite consensus disorder prediction 127 160 - -
Pumo4g01666 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Pumo4g01666 241 MobiDBLite consensus disorder prediction 143 160 - -
Pumo4g01666 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Pumo4g01666 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Pumo4g01666 241 Coils Coil 184 211 - -
Pumo4g01666 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Pumo4g01666 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01666 Pumo-Chr4 21118857 21123556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01666 - - gmx:100527687 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01666 4 21118857 21123556 Pumo4g01666 4 21118857 21123556 ECH
Pumo4g01666 4 21118857 21123556 Pumo8g02211 8 59161718 59165103 PCT