Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01982 ATGGACGTAGGAGCCGGCGACGATCATTCCCCGGAAGCGGCGATATCGCGGTGGAAATTGGCGGTGTCGCGGCAGTACCAGCACATGCTGGACAAAACGACGCCGCACGTGCTCCGGCGCTGGATCGGGTGCCTGGTGGTGGCCGCCGTGTACGTCCTCCGCGTTTACTTGGTCCAAGGCTTCTACATCGTCTCCTACGCCCTCGGCATTTACATCCTCAACCTCCTCATCGGCTTCCTCTCCCCTCAGGTCGATCCCGAGATTAGCGACGGCCCCACCCTCCCCACCCGAGGATCCGACGAGTTCCGCCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGGTACTCGATCACAAAGGCGTTTTGCATTGCATTTGTGATGACTTTCTTTAGTGCATTTGATGTTCCAGTATTCTGGCCAATACTCCTTTTCTACTGGGTGGTCCTATTCACACTTACAATGAGGAGACAGATATCACATATGATCAAATACAAATATGTACCATTCTCATTTGGGAAACAGCGCTATGATAGAAAGAGAGCAGCAGAAAGCACAAGCCCGACCATGGACTGA 576 0.5417 MDVGAGDDHSPEAAISRWKLAVSRQYQHMLDKTTPHVLRRWIGCLVVAAVYVLRVYLVQGFYIVSYALGIYILNLLIGFLSPQVDPEISDGPTLPTRGSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYVPFSFGKQRYDRKRAAESTSPTMD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01982 191 PANTHER PROTEIN RER1 7 181 IPR004932 GO:0016020
Pumo8g01982 191 Pfam Rer1 family 20 177 IPR004932 GO:0016020
Pumo8g01982 191 PIRSF AtER_Rer1p 1 188 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01982 Pumo-Chr8 56441066 56443727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01982 1 187 Miscellaneous Gene Families AT4G39220 68.947 5.39e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01982 - - gmx:100805147 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01982 8 56441066 56443727 Pumo8g01982 8 56441066 56443727 ECH
Pumo8g01982 8 56441066 56443727 Pumo4g01927 4 26134412 26137271 PCT