Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01927 ATGGATACTGATACTGGCGGAGGAGCATCACCTACAGCCGCCATATCGCGGTGGAAGTTCGCGGCGTGGCGGCAGTACCAGCACCTGCTGGACAAATCGACGCCGCACGTGGGACGGCGGTGGCTGGGGTTCGTGGCGGTGGCGCTGTTGTACGCGCTGCGCGTGTACTTGGTGGAAGGGTTCTACGTGGTTTCGTACGGTCTTGGCATTTACATCCTGAACCTTCTGATCGGGTTCCTCTCTCCTCAGGTGGACCCCGAGATTCTCGACGCCGATGGCCCCACCCTCCCCTCCACCGCTTCCGACGAGTTTCGCCCCTTCGTTCGCCGCCTCCCCGAGTTCAAGTTCTGGTACTCAATCACGAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTAGTGTGTTTGATGTTCCAGTGTTCTGGCCAATACTCCTCTTCTACTGGGTGGTCCTATTCACGCTTACAATGAGGAGACAGATATCTCACATGATTAAATACAAATATTTACCGTTCTCATCTGGAAAACAGCGCTATGATGTAAAGAGAGCACCACCAGAAAGCCCAAGCCTATCGGATGGCTGA 585 0.5402 MDTDTGGGASPTAAISRWKFAAWRQYQHLLDKSTPHVGRRWLGFVAVALLYALRVYLVEGFYVVSYGLGIYILNLLIGFLSPQVDPEILDADGPTLPSTASDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSVFDVPVFWPILLFYWVVLFTLTMRRQISHMIKYKYLPFSSGKQRYDVKRAPPESPSLSDG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01927 194 Pfam Rer1 family 21 179 IPR004932 GO:0016020
Pumo4g01927 194 PANTHER PROTEIN RER1 10 182 IPR004932 GO:0016020
Pumo4g01927 194 PIRSF AtER_Rer1p 1 189 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01927 Pumo-Chr4 26134412 26137271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01927 1 179 Miscellaneous Gene Families AT4G39220 68.333 2.55e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01927 - - gmx:100804538 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01927 4 26134412 26137271 Pumo4g01927 4 26134412 26137271 ECH
Pumo8g01982 8 56441066 56443727 Pumo4g01927 4 26134412 26137271 PCT