Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01876 ATGGCTCCCTCGTACTGCGTGAAGGAGAGTAAAGCCTGTGTGGGTTGGGTCGAGAAATACTTCGATGATTGTCTCTGCAATCTGAAAGATGAAATATCCTTTGGTTTTGGCTTCATAAGTCTCATATGTTGGGGAGTAGCAGAAATTCCTCAGATAATAACCAACTTTCGCGCTAAGTCTAGCCATGGTGTCTCCCTAGCCTTTCTTCTCACTTGGGTCGCCGGCGACATATTCAACCTCGTTGGTTGCCATCTGGAGCCCGCCACGCTGCCGACCCAGTACTACACAGCTCTGCTTTACACAATCACTACGATCGTGTTAGTACTGCAAAGTTTCTATTATGACTACATCTATAAATGGGGCAAGCGTCATCGGAAGACCAACATCGATGAGGCTCATGATGAAGAGAAAAAACCTTTGAGACCGAAACCATGCAACGAGTCTGGGATTCCAATACAAAATGACGGGCCCAAAGAAACGCCTCGACGGGAGTACTACTACAGGTCAGCGAGATCTTTGGCTGCTAATGATACTCCTCCATTTGGTACCTACTTGAGAGCTGCTAAAAGTGTCCCTTCAGCTATGGAAATGAACAATGATTCATCCTCTGATGATGAGGCACCACTTTCTTCTACCAAGCCTGCAACACAGCCTAGACCCATCCCCCGTTCTGTCCCTACAAGCTATGGAACTTTTCTAGCAGCATCTATGACCTTGCCCCGACAGGGTAATGCTTTGAAAGAGGGATACAAAATATTGAACGGAAGAAAACTACTCTTGCAGGAGCAAAACATGCACAGTGCTTTGGGTCAATGGTTAGGATGGCTCATGGCTGTTATCTATATGGGTGGCCGGCTTCCTCAAATATGGTTGAATATTAAAAGAGGGAGCGTGGAGGGCTTAAATCCTCTCATGTTCATCTTTGCATTGATTGCCAATGCCACTTACGTGGGAAGTATTCTTGTACGAACTACCGAATGGGAAAGCATCAGAGCTAATATGCCATGGCTGTTGGATGCCATAGTTTGCGTGGCATTGGACCTATTCATAATTTTGCAGTACGCCAATTATAGATACCTCCGGAAGAAAACAGGAAGTAATGATGCTGATTACGGAGACTACAAAGAAGCCAGCAAAACTTTTGTGTCTTGA 1152 0.4557 MAPSYCVKESKACVGWVEKYFDDCLCNLKDEISFGFGFISLICWGVAEIPQIITNFRAKSSHGVSLAFLLTWVAGDIFNLVGCHLEPATLPTQYYTALLYTITTIVLVLQSFYYDYIYKWGKRHRKTNIDEAHDEEKKPLRPKPCNESGIPIQNDGPKETPRREYYYRSARSLAANDTPPFGTYLRAAKSVPSAMEMNNDSSSDDEAPLSSTKPATQPRPIPRSVPTSYGTFLAASMTLPRQGNALKEGYKILNGRKLLLQEQNMHSALGQWLGWLMAVIYMGGRLPQIWLNIKRGSVEGLNPLMFIFALIANATYVGSILVRTTEWESIRANMPWLLDAIVCVALDLFIILQYANYRYLRKKTGSNDADYGDYKEASKTFVS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01876 383 Gene3D - 270 371 - -
Pumo8g01876 383 Gene3D - 35 128 - -
Pumo8g01876 383 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Pumo8g01876 383 SMART ctns 46 77 IPR006603 -
Pumo8g01876 383 SMART ctns 283 314 IPR006603 -
Pumo8g01876 383 MobiDBLite consensus disorder prediction 194 224 - -
Pumo8g01876 383 FunFam Vacuolar membrane PQ loop repeat protein 269 367 - -
Pumo8g01876 383 MobiDBLite consensus disorder prediction 131 161 - -
Pumo8g01876 383 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 360 - -
Pumo8g01876 383 Pfam PQ loop repeat 269 327 IPR006603 -
Pumo8g01876 383 Pfam PQ loop repeat 32 85 IPR006603 -
Pumo8g01876 383 MobiDBLite consensus disorder prediction 193 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01876 Pumo-Chr8 55156034 55161041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01876 K23678 - gmx:100815310 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01876 8 55156034 55161041 Pumo8g01876 8 55156034 55161041 ECH
Pumo8g01876 8 55156034 55161041 Pumo4g02079 4 29589433 29595158 PCT