Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02079 ATGGCACCTTCTTATTGCGTGAAGGAGAGAAAACCATGTGTGAGATGGGTTGAGAAATATTTCAAAGATTGCCTTTGCAATTTGAAAGATGACATATCGTTCAGTTTCGGGCTCATGAGTCTAGTATTCTGGGGTGTAGCTGAAATTCCTCAGATAATCACCATTTTTCGTACTAAGAAAAGCCATGGAGTGTCCCTTCTCTTTCTCCTCACTTGGGTCGCTGGGGATATATGCAATTTGACGGGTTGCCTCCTTGAACCAGCTACTTTGCCAACACAGTACTACACAGCTCTGCTTTACACAATCACTACGATCGTATTACTACTGCAAATCATATATTATGACTACATCAGCAGATGGTACAAACATCGTCAGAAGGTCAACCACATAAGGGATCATGAAGAAGAGAAAAAACCATTGAAGCCACCGAAACCAACTAACAAGTCTGGAATTCCAATACCAAATGGCACACCCAAGGCAGCACCTAGACAGGAGTACTATTATATGTCAGCAAGATCATTGGCTGGGAGTGGCACTCCACCCTGGGGAACCTACATGAGAGCTGCTAAAAGTGGTCCTTCAGCCATGGAATCGATCGATGACTCTTCTTCGGATGATGAAGCACCTCCAGCTTCCTCAAATAATTCTGCAACCCAGGCTAGGCCAATCCCACGTTCTGTTGCTGGAAGTTATGGAACATTTCTAGCAGCTACTGTTAATTTGCCTCTCAAGAGTAATGCTTTGAGAGAAGGATACATAGGATTCGGTGGAAGAAAACTTTTGCAGGAGTACGAGAAACATAGTGCATTTGGTCAATGGTTGGGATGGCTCATGGCTGCTATCTATATCAGTGGTCGGGTTCCTCAAATATGGTTGAACATTAAAAGAGGCAGTGTGGAGGGGTTAAACCCTTTCATGTTCGTCTTTGCATTGATCGCTAATGTCACTTACGTGGGAAGTATTCTTGTAAGAACTACAGAATGGGAAAGCATCAAAGCTAATATGCCATGGTTATTGGATGCTGTAATTTGCGTGGCATTGGACATTTTCATAATATCGCAGTACATCTACTATAGATACTTTAGAAGAAGAGAAGCAAATGATGATTACGAAGAAGCGGGAAAAGCTGCTGCCATCTTGATTTTTGTAGCTGCGATGTTGGATTGA 1167 0.4276 MAPSYCVKERKPCVRWVEKYFKDCLCNLKDDISFSFGLMSLVFWGVAEIPQIITIFRTKKSHGVSLLFLLTWVAGDICNLTGCLLEPATLPTQYYTALLYTITTIVLLLQIIYYDYISRWYKHRQKVNHIRDHEEEKKPLKPPKPTNKSGIPIPNGTPKAAPRQEYYYMSARSLAGSGTPPWGTYMRAAKSGPSAMESIDDSSSDDEAPPASSNNSATQARPIPRSVAGSYGTFLAATVNLPLKSNALREGYIGFGGRKLLQEYEKHSAFGQWLGWLMAAIYISGRVPQIWLNIKRGSVEGLNPFMFVFALIANVTYVGSILVRTTEWESIKANMPWLLDAVICVALDIFIISQYIYYRYFRRREANDDYEEAGKAAAILIFVAAMLD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02079 388 MobiDBLite consensus disorder prediction 205 223 - -
Pumo4g02079 388 FunFam PQ-loop repeat family protein / transmembrane family protein 32 128 - -
Pumo4g02079 388 Gene3D - 35 127 - -
Pumo4g02079 388 Gene3D - 271 371 - -
Pumo4g02079 388 FunFam Vacuolar membrane PQ loop repeat protein 270 368 - -
Pumo4g02079 388 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 5 362 - -
Pumo4g02079 388 MobiDBLite consensus disorder prediction 131 159 - -
Pumo4g02079 388 MobiDBLite consensus disorder prediction 193 223 - -
Pumo4g02079 388 SMART ctns 284 315 IPR006603 -
Pumo4g02079 388 SMART ctns 46 77 IPR006603 -
Pumo4g02079 388 Pfam PQ loop repeat 271 328 IPR006603 -
Pumo4g02079 388 Pfam PQ loop repeat 32 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02079 Pumo-Chr4 29589433 29595158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02079 K23678 - gmx:100789634 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02079 4 29589433 29595158 Pumo4g02079 4 29589433 29595158 ECH
Pumo8g01876 8 55156034 55161041 Pumo4g02079 4 29589433 29595158 PCT