Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01875 ATGGCCACTGCTATACATTCCTTCATATTAATAATCCCTTTCTGTCTCCTCCTTATCATTTCCACTCATGCCACTGCCACTACTCATCATCAACAACGCTTTAAACAAGCTCCGAAATTCTACAACTCGCCCAGCTGTCCCACCATTCGCCTCTCACCCACCGACACGTGTTCCGACGAGGCAGTCCACGTGGCCATGACACTCGACGTCACCTACCTCCGAGGCTCCATGGCTGCCATCCTCTCCGTCCTCCAGCACTCTTCCTGCCCCGAAAACGTCATCTTCCACTTCGTCACCGCCGCCTCCCCCTCCGCCCTCCTCAACCGCACCCTCTCCACCTCCTTCCCATATTTAAAATTCCAAATCTACCCATTCGACGACGCCGCCGTCGCCGGCCTCATCTCCACCTCCATCCGCTCCGCTCTCGACTGCCCCCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTCCCCTCCTGCGTCCGCAAAATCGTCTACCTCGACTCCGACCTCGTACTCGTCGACGACATCGCCAAACTCGCCGCCACACCCCTCGGAGAAAACGAAAACACCGTCCTCGCCGCCCCCGAATACTGCAACGCCAACTTCAGCGCCTACTTCACTCCCTCCTTCTGGTCCAATCCCTCCCTCTCCCTCACCTTCGAGGGCCGCAGGCCCTGCTACTTCAACACCGGCGTCATGGTCATTGATTTACAACGCTGGCGGGCCGGGGACTACACCACCAAGATCCAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTCGGCTCGTTACCGCCCTTTTTACTCGTTTTCGCAGGAAACATACGCCCGGTGGATCTCAGGTGGAACCAACACGGGCTCGGCGGGGATAACTTCCGTGGCCTTTGTAGAGACTTGCATCCGGGCCCGGTCAGCCTCCTGCATTGGAGTGGCAAGGGCAAGCCCTGGGCCCGCCTCGACGCCAACCGCCCTTGCCCCTTGGATGCCTTATGGGCTCCCTATGATCTTCTCCAAACTCCTTTCGCTCTCGAAGCCTAG 1050 0.5848 MATAIHSFILIIPFCLLLIISTHATATTHHQQRFKQAPKFYNSPSCPTIRLSPTDTCSDEAVHVAMTLDVTYLRGSMAAILSVLQHSSCPENVIFHFVTAASPSALLNRTLSTSFPYLKFQIYPFDDAAVAGLISTSIRSALDCPLNYARNYLANLLPSCVRKIVYLDSDLVLVDDIAKLAATPLGENENTVLAAPEYCNANFSAYFTPSFWSNPSLSLTFEGRRPCYFNTGVMVIDLQRWRAGDYTTKIQEWMELQKRMRIYELGSLPPFLLVFAGNIRPVDLRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFALEA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01875 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 63 329 IPR029044 -
Pumo8g01875 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 62 340 IPR029044 -
Pumo8g01875 349 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 11 342 - -
Pumo8g01875 349 FunFam Hexosyltransferase 63 329 - -
Pumo8g01875 349 Pfam Glycosyl transferase family 8 63 322 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01875 Pumo-Chr8 55145580 55147497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01875 14 347 Glycosyltransferase AT3G50760 70.920 1.00e-178 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01875 K20893 - gmx:100783054 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01875 8 55145580 55147497 Pumo8g01875 8 55145580 55147497 ECH
Pumo4g02080 4 29608336 29609503 Pumo8g01875 8 55145580 55147497 ECH
Pumo8g01875 8 55145580 55147497 Pumo4g02080 4 29608336 29609503 PCT