Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02080 ATGGCAATGGCACCTAATTCCTTCTTCTTCTTCACATTCGCATGCTTCATCCTTCTCTTCTCAACACAAACCACCAGCACCAGTACCACACAACAGCGTTTCAAGGAAGCTCCAAAATTCTACAACTCCCCCACGTGCGACACCCTCCACCACCACCCGAACCACACGTGCCCTGCCAACGCAGTCCACGTGGCAATGACCCTCGACGTGGCGTACCTCCGAGGCTCCATGGCGGCAATCCTCTCCGTGCTCCAACACACCTCATGCCCCGAAAACGTAATCTTCCACTTCGTCTCCGCAGCTTCAAAACCTTCCTCCGCCACAACGCTAAACAAAACACTAACCACTTCATTCCCATACCTGAATTTCCGAATCTACCCCTTCGACGACGACGCCGTTTCGCGCCTCATCTCCACCTCTATACGCTCCGCACTGGATTGCCCCCTCAACTACGCGCGAAGCTACCTCTCAAGCCTCCTCCCTCGCTGCGTCACGAAAGTCGTCTACCTCGACTCCGATTTGATCCTCGTCGACGACATCGCGAAGCTCGCGGCCACCGCTCTTCCCGGCGCGACGGTCCTCGCCGCGCCGGAGTACTGCTCCGCTAACTTCTCGGCCTACTTCACCCCCTCGTTCTGGTCCAACCCCTCGCTCTCGCTCGCCTTCGCGAACCGCCGGAGGCCGTGCTACTTCAACACCGGCGTGATGGTCATCGAGCTCCGGCGGTGGCGCGCCGGCGACTACACCACCGAGATCGAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTACGAGCTCGGGTCGCTGCCGCCGTTTCTGCTGGTGTTCGCGGGGAGAATTGTGGCCGTGGACCACCGGTGGAACCAGCACGGGCTCGGCGGGGACAACTTTCGCGGGCTTTGTCGGGGCCTGCATCCGGGGCCCGTGAGCCTGCTGCATTGGAGTGGGAAGGGGAAGCCGTGGGCACGGCTCGACGCGGGCAGGCCTTGCCCTTTGGATGCCTTGTGGGCTCCCTACGATCTGCTCGAGACGCGTTTCGCGCTTCAGGCATGGCGGACGTCGTAA 1068 0.6077 MAMAPNSFFFFTFACFILLFSTQTTSTSTTQQRFKEAPKFYNSPTCDTLHHHPNHTCPANAVHVAMTLDVAYLRGSMAAILSVLQHTSCPENVIFHFVSAASKPSSATTLNKTLTTSFPYLNFRIYPFDDDAVSRLISTSIRSALDCPLNYARSYLSSLLPRCVTKVVYLDSDLILVDDIAKLAATALPGATVLAAPEYCSANFSAYFTPSFWSNPSLSLAFANRRRPCYFNTGVMVIELRRWRAGDYTTEIEEWMELQKRMRIYELGSLPPFLLVFAGRIVAVDHRWNQHGLGGDNFRGLCRGLHPGPVSLLHWSGKGKPWARLDAGRPCPLDALWAPYDLLETRFALQAWRTS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02080 355 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 12 344 - -
Pumo4g02080 355 Pfam Glycosyl transferase family 8 63 324 IPR002495 GO:0016757
Pumo4g02080 355 SUPERFAMILY Nucleotide-diphospho-sugar transferases 62 342 IPR029044 -
Pumo4g02080 355 FunFam Hexosyltransferase 63 331 - -
Pumo4g02080 355 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 63 329 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02080 Pumo-Chr4 29608336 29609503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02080 16 349 Glycosyltransferase AT3G50760 69.527 2.00e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02080 K20893 - gmx:100805007 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02080 4 29608336 29609503 Pumo4g02080 4 29608336 29609503 ECH
Pumo4g02080 4 29608336 29609503 Pumo8g01875 8 55145580 55147497 ECH
Pumo8g01875 8 55145580 55147497 Pumo4g02080 4 29608336 29609503 PCT