Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01870 ATGCATCCAATGGTCCAAAAGGCTCCTGCTGGAAAGAGGCCGGAGAAGATTGTAGGAGGGGATCTGTTGAGGCAGCAATACCTTTGTCGAATCTCAGATCTAAAAACAAATATAACGAGGCCAATGCCACCGCACCCACACGCATATCTCGCACCAAACACGAGTTCTGTGAATCTTGGAACATGCTCTATGCTCAACACACCTTCTTCACTTCTCATTCCCCCTTTTCACACTCTCAGAACACTTCCCATTGCCCCCAATCAAGGAACAGCAAAACTAATTTCCTTTCTTCCCTCTCTCTCTGTCTCCACTGTGCTCACTAAGGAAGACACTGTAAGAACCATTCGATTTCAAGGCCTACATGCTCAACAAGGTCAACACAGTGAACCAAGCCTTGGACGCTGCCATTGCGCTCAGGGAACCGAAGAAGCTCCACGAAGCCATGCGCTACTCTCTCTTCGCCGGCGGCAAGAGGGTCAGCCCGGTGCTCTGCATCGCCGCCTGCGAGATCGTCAGAGGGAGCGAGGCCGCCGCCCTCCCCGCCGCGTGCGCCGTCGAGATGATCCACACAATGTCACTCATCCACGACGACTTGCCCTGTATGGACAACGACGACCTCCGCCGCGGAAAACCGACCAACCACAGGGTCTTCGGCGAGGACGTGGCAGTCCTCGGCGGCGAGGGTGGTTCGCGCAATTGGGGAGTTGGCGAAATCGATTGGCGCGGAAGGTGGGGGGTGGGTCGGACGAGGAGGTTGAGAGATTAAGGAAGTTCGATAGGTGCATTGGGTTGTTGTACCAGGTTGTCGATGACATTCTCGATGTTACCAAGTCCTCCGAGGAATTGAGGAAAACGGCGGGGAAGGACTTGGTGGCTGATAAGGTGACGTACCCTAAGCTTTTGGGGATACATAAGTCTAAGGAGTTTGCTCATAAACTGATGCAGGATGCGAAGGCGGCTCCACTGTTTGCTTTAACCAAGTACATTGCTTACAGGCAACATTGA 1005 0.5343 MHPMVQKAPAGKRPEKIVGGDLLRQQYLCRISDLKTNITRPMPPHPHAYLAPNTSSVNLGTCSMLNTPSSLLIPPFHTLRTLPIAPNQGTAKLISFLPSLSVSTVLTKEDTVRTIRFQGLHAQQGQHSEPSLGRCHCAQGTEEAPRSHALLSLRRRQEGQPGALHRRLRDRQRERGRRPPRRVRRRDDPHNVTHPRRLALYGQRRPPPRKTDQPQGLRRGRGSPRRRGWFAQLGSWRNRLARKVGGGSDEEVERLRKFDRCIGLLYQVVDDILDVTKSSEELRKTAGKDLVADKVTYPKLLGIHKSKEFAHKLMQDAKAAPLFALTKYIAYRQH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01870 334 MobiDBLite consensus disorder prediction 153 228 - -
Pumo8g01870 334 Gene3D Farnesyl Diphosphate Synthase 237 334 IPR008949 -
Pumo8g01870 334 MobiDBLite consensus disorder prediction 170 184 - -
Pumo8g01870 334 SUPERFAMILY Terpenoid synthases 238 320 IPR008949 -
Pumo8g01870 334 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 244 334 - -
Pumo8g01870 334 Pfam Polyprenyl synthetase 241 311 IPR000092 GO:0008299
Pumo8g01870 334 ProSitePatterns Polyprenyl synthases signature 2. 262 274 IPR033749 -
Pumo8g01870 334 MobiDBLite consensus disorder prediction 121 140 - -
Pumo8g01870 334 CDD Trans_IPPS 244 332 - -
Pumo8g01870 334 MobiDBLite consensus disorder prediction 153 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01870 Pumo-Chr8 55097199 55098661 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01870 K13789 - gmx:100778289 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01870 8 55097199 55098661 Pumo8g01870 8 55097199 55098661 ECH
Pumo4g02085 4 29723662 29724779 Pumo8g01870 8 55097199 55098661 ECH
Pumo8g01870 8 55097199 55098661 Pumo4g02085 4 29723662 29724779 PCT