Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02085 ATGAGTGCCGTGAATTTGAACACATGGGCACGCCCCAGCTTCATTTTGAACCCAGCCACGAGATCCAGATCTCCAACCTTTCATCATTTTTTTAACGGCTTCAAAAACTTCCCCATTCCCTCCGTCACCGTTGCCAAACGGCGAGGGGACAATAAACCTTCTTCCGCGTCATTCTCCGTCTCTGCGGTGTTAACGAAAGAGGACGCCGTGGAGACGGAAGAGAAACCAGCGTTTAACTTCAAGAACTACATGGTTACCAAAGCGAACGCGGTGAACAAGGCGTTAGACGGCGCCGTTTCGCTCCGCGAGCCGCTGAAGATCCACGAGGCGATGCGGTACTCGCTCCTCGCCGGCGGGAAGCGCGTGCGCCCCGTGCTCTGCGTCGCCGCCTGCGAGCTCGTCGGCGGCGCGGAGGCCACGGCGATGCCCGCCGCCTGCGCCATCGAGATGATCCACACCATGTCGCTCATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGCAAGCCCACCAACCACAAGGTCTTCGGCGAGGACGTCGCCGTCCTCGCCGGCGACGCGCTCCTCGCCTTCGCCTTCGAGCACATCGCGGTCTCCACCTGCGGGCGCCTCCCCGGCGCGGATCGTGCGCGCGATCGGCGAGCTCGCGCGGTCGATCGGCGCCGAGGGCCTCGTCGCCGGCCAGGTCGTCGACATCAATTCCGAAGGCCTGGCCGACGTCGGCCTCGAGAGGCTGGAATTCATCCACATCCACAAGACCGCCGGTGCTTCTCGAGGGCGCGGTGGTCCTCGGCGCCATCCTGGGCGGTGGTTGATGACATTCTTGATGTTACCAAGTCTTCCCAGGAATTGGGAAAAACCGCGGGAAAGGACCTTGTGGCTGATAAGGTTACTTACCCCAAGCTTTTGGGGATTGAGAGGTCTCAGGAGTTTGCTGCGAAACTGAACAAGGATGCTCAGGATCAGCTTGTTGGGTTTGACCCTGTTAAGGCTGCTCCTTTAGTTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAG 1053 0.6002 MSAVNLNTWARPSFILNPATRSRSPTFHHFFNGFKNFPIPSVTVAKRRGDNKPSSASFSVSAVLTKEDAVETEEKPAFNFKNYMVTKANAVNKALDGAVSLREPLKIHEAMRYSLLAGGKRVRPVLCVAACELVGGAEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTCGRLPGADRARDRRARAVDRRRGPRRRPGRRHQFRRPGRRRPREAGIHPHPQDRRCFSRARWSSAPSWAVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIERSQEFAAKLNKDAQDQLVGFDPVKAAPLVALANYIAYRQN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02085 350 ProSitePatterns Polyprenyl synthases signature 1. 156 172 IPR033749 -
Pumo4g02085 350 MobiDBLite consensus disorder prediction 213 256 - -
Pumo4g02085 350 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 273 350 - -
Pumo4g02085 350 MobiDBLite consensus disorder prediction 222 247 - -
Pumo4g02085 350 SUPERFAMILY Terpenoid synthases 79 207 IPR008949 -
Pumo4g02085 350 SUPERFAMILY Terpenoid synthases 274 332 IPR008949 -
Pumo4g02085 350 Gene3D Farnesyl Diphosphate Synthase 271 350 IPR008949 -
Pumo4g02085 350 Gene3D Farnesyl Diphosphate Synthase 80 224 IPR008949 -
Pumo4g02085 350 CDD Trans_IPPS_HT 107 348 IPR000092 GO:0008299
Pumo4g02085 350 Pfam Polyprenyl synthetase 274 318 IPR000092 GO:0008299
Pumo4g02085 350 Pfam Polyprenyl synthetase 107 201 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02085 Pumo-Chr4 29723662 29724779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02085 K13789 - gmx:100785539 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02085 4 29723662 29724779 Pumo4g02085 4 29723662 29724779 ECH
Pumo4g02085 4 29723662 29724779 Pumo8g01870 8 55097199 55098661 ECH
Pumo8g01870 8 55097199 55098661 Pumo4g02085 4 29723662 29724779 PCT