Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g01120 ATGAAGAGGGGTAGTAAAGCAGACCCCTTTGTGCTACCCAACAAACTCACACTGCTTCAGATTTTCATGGTGGTGATGCTCGTTTACCTTCTCTTCATGAGCTTCGAAATCCCTCTCGCTTTCAGAGCCGAAAACGGCGCCGTTTTCCTCACCGACGCATTGCCCATGCCCATGCCGCTCATGCTCGAAGAATCACACAACAGGGTCCAAATTAGAGCACCCAGAGGGTTGAAGTTGGAGAAAGTTTCCACCTTGAGGTTCAACGGGAGCTTCGCGGAGGGTTCGGAGCTGCACAAGGTGGCGCGGCACGCGTGGGTCGCGGGGGAGAAGCTCTGGGGGCAAGTAGAGAGTGGGAAAGTGAAGAGCTTTGTGAAAACTAAGGTCGAAAACGGGTCGGACTCGTGTCCGAATTCGGTTTCGGTTTCCGGGGCGGAGTTTCGGGACAAAGGGGTGATGGTGCTGCCGTGCGGTTTGACGCTTTGGTCGCACGTGACGGTGGTGGGGACGCCGCGGTGGGCGCACGCTGAGAGGAACCCTAAGATAGCGGTGGTCAGGGACGGGGACGAGGCGGTGATGGTGTCGCAGTTCATGATGGAGTTGCAAGGCTTGAAGGCCGTGGACAAAGAGGAGCCTCCGAGGATTCTGCATTTCAATCCGAGGTTGAGAGGGGATTGGAGTGGGAAGCCAGTGATTGAGCAGAACACTTGCTATAGGATGCAGTGGGGTTCTGCTCTCAGGTGTGAGGGGTGGAAGTCTCGTGCGGATGAAGAAACTGTTGATGGACATGTGAAATGTGAAAAGTGGATTCGTGATGACAATAATCATTCTGAAGAGTGGAAGGCGACATGGTGGTTAAACAGATTGATAGGGCGAAAAAAGGTGACGGTAGACTGGCCATATCCTTTTGCAGAGGGCAAGTTATTTGTTCTCACCATAAGTGCTGGCTTGGAAGGTTACCATGTTAGTGTGGACGGGAGGCATGTGACATCCTTTCCCTATCGCACAGGATTTGCTCTTGAGGATGCTACTGGACTATCTATAAATGGGGATGTTGATGTGCACTCTATATTTGCTGCTTCCTTACCTACATCACATCCTAGCTTTGCTCCACAGATGCATCTTGAATTGCTTCCTCGGTGGAAAGCTCCTCCTCTTCACAATGAGAATGTGGAGCTTTTCATTGGCATCCTTTCTGCTGGAAACCATTTTGCTGAACGGATGGCAGTGAGAAAGTCCTGGATGCAGCATAAGCTAATCCAATCTTCACACGTTGTGGCTCGATTTTTTGTAGCCTTGCATGCAAGGAAGGATATAAATGTGGACATAAAGAAAGAAGCAGAGTATTTTGGTGATATTATTATAGTCCCATACATGGATCATTATGACCTTGTTGTGTTGAAGACCATAGCTATCTGTGAATATGGGATTCATACTGTGGCTGCTAAGTATATAATGAAATGTGATGATGACACATTTGTCAGAGTGGATTCTATCATAAACGAAGCAAGACAAATTCAAAGTAGAAGTCTCTACATGGGAAATATGAATTATCACCATAGGCCTCTTCGCCATGGGAAATGGGCTGTAACTTATGAGGAATGGGTAGAGGAAGAATATCCTATCTATGCCAACGGTCCAGGTTACATAGTCTCAGCTGACATTGCTCAGTTCATTGTATCTGAATTTGAGAAGCGCAAATTAAAATTGTTTAAAATGGAGGACGTGAGCATGGGAATGTGGGTGGAGCAGTTCAACAGCACAAGGCAAGTAGAGTATGTGCACAACTTGAAGTTCTGCCAATTTGGGTGCATTGAAGAGTACTACACTGCACATTACCAATCACCAAGACAAATGACATGCATGTGGGAAAAATTGCAACATCAAGGAAAACCACTCTGTTGCAACATGAGATGA 1914 0.476 MKRGSKADPFVLPNKLTLLQIFMVVMLVYLLFMSFEIPLAFRAENGAVFLTDALPMPMPLMLEESHNRVQIRAPRGLKLEKVSTLRFNGSFAEGSELHKVARHAWVAGEKLWGQVESGKVKSFVKTKVENGSDSCPNSVSVSGAEFRDKGVMVLPCGLTLWSHVTVVGTPRWAHAERNPKIAVVRDGDEAVMVSQFMMELQGLKAVDKEEPPRILHFNPRLRGDWSGKPVIEQNTCYRMQWGSALRCEGWKSRADEETVDGHVKCEKWIRDDNNHSEEWKATWWLNRLIGRKKVTVDWPYPFAEGKLFVLTISAGLEGYHVSVDGRHVTSFPYRTGFALEDATGLSINGDVDVHSIFAASLPTSHPSFAPQMHLELLPRWKAPPLHNENVELFIGILSAGNHFAERMAVRKSWMQHKLIQSSHVVARFFVALHARKDINVDIKKEAEYFGDIIIVPYMDHYDLVVLKTIAICEYGIHTVAAKYIMKCDDDTFVRVDSIINEARQIQSRSLYMGNMNYHHRPLRHGKWAVTYEEWVEEEYPIYANGPGYIVSADIAQFIVSEFEKRKLKLFKMEDVSMGMWVEQFNSTRQVEYVHNLKFCQFGCIEEYYTAHYQSPRQMTCMWEKLQHQGKPLCCNMR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g01120 637 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 150 359 IPR001079 GO:0030246
Pumo8g01120 637 FunFam Hydroxyproline O-galactosyltransferase GALT2 274 357 - -
Pumo8g01120 637 Pfam Galactosyltransferase 405 585 IPR002659 GO:0006486|GO:0016020|GO:0016758
Pumo8g01120 637 FunFam Hydroxyproline O-galactosyltransferase GALT4 149 267 - -
Pumo8g01120 637 CDD GLECT 154 357 IPR001079 GO:0030246
Pumo8g01120 637 Gene3D - 187 357 - -
Pumo8g01120 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 152 357 IPR013320 -
Pumo8g01120 637 SMART Gal_bind_lectin_2 154 358 IPR001079 GO:0030246
Pumo8g01120 637 Gene3D - 381 630 - -
Pumo8g01120 637 Pfam Galactoside-binding lectin 151 357 IPR001079 GO:0030246
Pumo8g01120 637 FunFam Hydroxyproline O-galactosyltransferase 383 625 - -
Pumo8g01120 637 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 327 587 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g01120 Pumo-Chr8 41337136 41342802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g01120 19 637 Glycosyltransferase AT1G74800 61.221 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo8g01120 K20843 - gmx:100803219 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g01120 8 41337136 41342802 Pumo8g01120 8 41337136 41342802 ECH
Pumo4g00510 4 6789094 6795388 Pumo8g01120 8 41337136 41342802 PCT