Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01987 ATGCATCAAAAGAAATCCGAAGTCCAGATCGGAAAAGAAAGCACCGGCGTCTCTTCCGATTTCAACCACCACCCAATCCCAAACCTAACAACTCCGAACCCAAACCCAAACCCAAACCTAGATGTTCTTCTTTCTCTTCAATCACTAACCTCCTCCACCGCACCTTACAAAAGACCCTCCCTCACCCAACCCCAACCCCTCCTTTCCAAATCCCCAACCCTTCAAAAATTCCCAATCCCAAAGCCACGCCACGTCACCACCACCACCACCACCACCCTAATTCCGACGCTTCTCTCCGCCGCGCTGTCCCTGCGCCGCCGGCTCCGCCTCCGCCTCCGCCACCGCGTCCGGCTCTTCCTCTTCCTCTCGCTCCCCTTCTTCTACTTCCTCGTCTCCCACCCCACCAACTCCATCCTCCTTGACTTCCTCTCCGCCTTCTCCTTCTCCGCCGCGCTTCTCTTCTCCCTCAACCTCGCCCTCCCGCGAATCCCATCGCTCCGCCTCTTCCTCAGCCTCGATCCCAAAGCCCGGCCCACCCTCAAGCTCCCCGTCTTCTGGACCGTGGGCTCCCGGGCCCGCGCCCCTCCGGCCCAAGCCACCAAATTCTGCTTCTCCGTGGTCGCGTACTCGAACGGCGACGTTTACGAGGGAGAGTTCAAGGGTGGGAAGTGCTGCGGGAGTGGGGTGTACTACTACAGTATGAATGGGAGGTATGAGGGGGATTGGGTGGATGGGAAGTACGATGGGTTTGGGGTGGAGACGTGGGCCCGGGGGAGTAGGTACCGCGGGCAGTACCGGCAGGGGCTCCGGCATGGGTTCGGGGTTTACCGGTTTTACACGGGGGATGTTTATGCTGGGGAGTGGGCCAGTGGGCAGAGCCATGGCTGTGGGGTTCACACGTGCGATGATGGGAGCAGGTACGTGGGGGAGTTCAAGTGGGGCGTTAAGCATGGCCTTGGACACTACCACTTTAGAAATGGCGATACATATGCTGGTGAATACTTTGCAGATAAGATGCATGGGTTTGGGGTATATAGTTTTGCAAATGGCCATTGTTATGAAGGATCCTGGCATGAAGGAAAAAGGCAAGGTCTTGGAATGTATACATTTAGAAATGGAGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCGAGCACACAGAGTGCCACCTATCCTGTTTCTCCTGTTGGTGTCAATCATTCCAGAGTACTTAATGCAGTGCAGGAAGCAAGAAGAGCAGCTCAGAAGGCCTATGATGTGGCCAAGGTAGATGAACGGGTGAATAGAGCAGTAGCAGCCGCCAACCGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAGGCTGTGCAAAACCAAATGCATCATAACGTTAACAGCAGGAGCATCCCAATTCCCATTGTGTGA 1416 0.5558 MHQKKSEVQIGKESTGVSSDFNHHPIPNLTTPNPNPNPNLDVLLSLQSLTSSTAPYKRPSLTQPQPLLSKSPTLQKFPIPKPRHVTTTTTTTLIPTLLSAALSLRRRLRLRLRHRVRLFLFLSLPFFYFLVSHPTNSILLDFLSAFSFSAALLFSLNLALPRIPSLRLFLSLDPKARPTLKLPVFWTVGSRARAPPAQATKFCFSVVAYSNGDVYEGEFKGGKCCGSGVYYYSMNGRYEGDWVDGKYDGFGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWASGQSHGCGVHTCDDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGVYSFANGHCYEGSWHEGKRQGLGMYTFRNGETQSGHWQNGVLDIPSTQSATYPVSPVGVNHSRVLNAVQEARRAAQKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQNQMHHNVNSRSIPIPIV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01987 471 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 244 289 - -
Pumo7g01987 471 Pfam MORN repeat 238 260 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 330 351 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 215 236 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 261 283 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 307 329 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 284 306 IPR003409 -
Pumo7g01987 471 Pfam MORN repeat 353 374 IPR003409 -
Pumo7g01987 471 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 290 335 - -
Pumo7g01987 471 MobiDBLite consensus disorder prediction 10 28 - -
Pumo7g01987 471 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 209 314 - -
Pumo7g01987 471 MobiDBLite consensus disorder prediction 1 39 - -
Pumo7g01987 471 Gene3D - 202 244 - -
Pumo7g01987 471 Gene3D - 290 335 - -
Pumo7g01987 471 Gene3D - 336 400 - -
Pumo7g01987 471 Gene3D - 245 289 - -
Pumo7g01987 471 SMART morn 236 257 IPR003409 -
Pumo7g01987 471 SMART morn 305 326 IPR003409 -
Pumo7g01987 471 SMART morn 351 372 IPR003409 -
Pumo7g01987 471 SMART morn 259 280 IPR003409 -
Pumo7g01987 471 SMART morn 213 234 IPR003409 -
Pumo7g01987 471 SMART morn 328 349 IPR003409 -
Pumo7g01987 471 SMART morn 282 303 IPR003409 -
Pumo7g01987 471 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 336 381 - -
Pumo7g01987 471 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 162 426 - -
Pumo7g01987 471 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 281 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01987 Pumo-Chr7 53339373 53347142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01987 208 386 Acyl Lipid Metabolism Gene Families AT1G60890 38.547 1.10e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01987 - - gmx:100784010 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01987 7 53339373 53347142 Pumo5g01704 5 45933081 45938047 PCT