Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01704 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAATCCGTCACCCCCGCTGCAATACCAAAAACACCCCTACCACCGCCACCAGCAATTCTACCCCCAAATAGAAATTGACATATCCCCACCGCAGCAACCCAACACCGCGCCGCAGCGGAACCCTCCTCCCCCTTCCTCTTCCCTTTCTAAACAGAAACAGATTTTCAGCTTCAAGCCGCACAACGCCGCGTTCTTCTCCGTAACCGTCGCCGCGAAGAGCGCCGCGTTCCGCGCGCTGCGGCGCGTGAGGCGGCAGCGCGCGTTGCTGCTACTCGCGGTCCCGCTCCTCTACCTCTACTTCCTCGTCTCGCGCTCGTTCCTCTTGGACCTCCTCTCCGCGGTCGCGTTCTCCGCGGCGCTCGTGTTCTCGCTCAACCTCGCGTTCCCGCTGCCGCTGCGGTCGATCCGGCTGAGGGCGGGGAGGTCCGCCGTGGTGGCGCGGCCGAGCCCCGCGCTGCCGGTGTTCTGGACGATCGGGTCGCGGCCGAAGTCGGAGAAGCGCGTGGCGTCGGGGTGCTGGGTGCAGGTGTTCGGAAACGGTGACGTTTACGAGGGGGAGTTCCACCGGGGGAAGTGTTCGGGGAGCGGGGTGTATTACTACAGCAGGAGTGGGAGGTACGAGGGGGATTGGGTGGACGGGAAGTATGATGGGTATGGGGTGGAGACTTGGGCGCGCGGGAGTAGGTATCGTGGATGTTACCGGCAGGGACTGAGGCATGGGTTTGGGGTGTATAGGTTTTACACCGGGGATGTGTATGCGGGAGAGTGGTCTAATGGGCAGAGTCACGGGTGTGGGGTTCACACGTGCGAGGATGGGAGTAGGTATGTTGGGGAGTTTAAATGGGGGGTTAAGCATGGCCTTGGTCATTACCATTTCAGAAATGGAGATACATATGCGGGTGAATACTTTGCGGACAAGATGCATGGTTTTGGCATATATCGTTTTGCAAATGGCCATCGTTATGAAGGAGCATGGCATGAAGGCAGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGTGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACAGAACACCACTTCTCCAGTTTCTCCTGTTGGTGTCTATCATTCCAAAGTACTCAATGCAGTGCAGGAAGCAAGACGAGCAGCAGAGAAAGCCTATGATGTGGCTAAGGTAGATGAAGGGGTGAACAGAGCTGTAGCAGCTTCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTGAAAGCTGTGCAAAAGCAGAACTATCATGTTAACAGTGAAAGCTTCTCAATTCCTGTTGTGTAA 1380 0.5565 MHQKKSEVQIGKESVGVSSDFNPSPPLQYQKHPYHRHQQFYPQIEIDISPPQQPNTAPQRNPPPPSSSLSKQKQIFSFKPHNAAFFSVTVAAKSAAFRALRRVRRQRALLLLAVPLLYLYFLVSRSFLLDLLSAVAFSAALVFSLNLAFPLPLRSIRLRAGRSAVVARPSPALPVFWTIGSRPKSEKRVASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGIYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTQNTTSPVSPVGVYHSKVLNAVQEARRAAEKAYDVAKVDEGVNRAVAASNRAANAARVAAVKAVQKQNYHVNSESFSIPVV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01704 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 279 324 - -
Pumo5g01704 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 188 232 - -
Pumo5g01704 459 MobiDBLite consensus disorder prediction 1 32 - -
Pumo5g01704 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 233 278 - -
Pumo5g01704 459 SMART morn 225 246 IPR003409 -
Pumo5g01704 459 SMART morn 248 269 IPR003409 -
Pumo5g01704 459 SMART morn 294 315 IPR003409 -
Pumo5g01704 459 SMART morn 202 223 IPR003409 -
Pumo5g01704 459 SMART morn 340 361 IPR003409 -
Pumo5g01704 459 SMART morn 271 292 IPR003409 -
Pumo5g01704 459 SMART morn 317 338 IPR003409 -
Pumo5g01704 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 268 372 - -
Pumo5g01704 459 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 36 413 - -
Pumo5g01704 459 Gene3D - 234 278 - -
Pumo5g01704 459 Gene3D - 326 392 - -
Pumo5g01704 459 Gene3D - 186 233 - -
Pumo5g01704 459 Gene3D - 279 325 - -
Pumo5g01704 459 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 198 290 - -
Pumo5g01704 459 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 325 370 - -
Pumo5g01704 459 MobiDBLite consensus disorder prediction 12 26 - -
Pumo5g01704 459 MobiDBLite consensus disorder prediction 45 72 - -
Pumo5g01704 459 Pfam MORN repeat 319 341 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 296 318 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 273 295 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 250 272 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 204 222 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 342 363 IPR003409 -
Pumo5g01704 459 Pfam MORN repeat 227 249 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01704 Pumo-Chr5 45933081 45938047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01704 196 375 Acyl Lipid Metabolism Gene Families AT1G60890 36.667 3.58e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01704 - - gmx:102667330 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01704 5 45933081 45938047 Pumo5g01704 5 45933081 45938047 ECH
Pumo7g01987 7 53339373 53347142 Pumo5g01704 5 45933081 45938047 PCT