Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01933 ATGAAGCTTGCTATCAGAATAGCTTCAACCCAACCACGTGCATCATCCTCCTCTATTTCCCAACCCAATAACCCTACTTTTCCATCGTGTGAATCCAACGCAAACTCACAATTCAACAAGTCTTTGCTCTCATGGAACCGACTCAAGCCTCCCTCAACCAAATGCAACTTCCCCAAACTCCGCCAGAAGTGGAAGCAATACCAAGGAATCAACCACTGGGAAGGCTTGCTGGATCCTCTTGACGATGATCTACGTTGGGAAATCCTAAGATATGGCCACTTTGTGGATGCTACCTATAGCTCCTTTGACTTTGACCCTTCTTCTCTCACCTACGCCACGTGTCTCTACTTGAAGAGATCGCTATTGGGCAAGTGCGGGTTGGGAAACTACGGATATCGATTAACTAGATATCTACATGTCACGTGTGGGATTCACGTGCCAGCGTGGATAAATAAAATTTTTAAACAGGCCTGTATCCGATCCAGCTGGATCGGGTACGTGGCAATTTGTGATAACAAGAAAGAAATCACGCGACTCGGTCGACGCGATATTGTGATTGCATTCAGGGGAACGGCAACTTGCTTGGAGTGGTTGGAAAACCTACGCGCCACCTTGACACACTTGCCAGGCCACGTGGTGGGAGGAGATGATGGTGGTGTTGGTCCCATGGTGCAAAAAGGGTTTTTGAGCCTTTACACGTCCAAAACCACCACACGTGCGAGCTTGCAAGAAATGGTAAGAGAAGAGATTGGAAGAGTGATCCAAAGATACACCAATGAGCCACTTAGCCTAACCCTAACGGGTCACAGCCTTGGAGCCGCACTCGCAATCCTAAGCGCGTATGATATAACCGCCACCTTCAAGAACGCACCAATGGTCACGGTTATATCTTTTGGTGGACCCCGCGTGGGAAACGAGAGTTTTAGGAAAAAATTGGAAGAAAATGGAATAAGGATACTAAGAATTGTAAACTCCGATGATGTTGTGACTAGGGTTCCGGGGCTTGTCGTGAATTTAGATGACGTGGCGAGTAACGAAGATGCCCACGTGGGAATTTGGTCAAGGTGGTTGCACAAGTACGTAGAAGACATGCAATTGGTGTATGCTGACATTGGACAAGAGTTGAGGCTAAGTAGCAAGGAGTTTCCAAATCTCAATAAGGGAGATGTTGCTATGTGTCATGACCTCAAGACATACCTTCATTTGGTGAAAAATTTTGTAAGCTCCTCTTGTCCTTGCAAGCACAAAAAATCCACTCCATTGATCAGCCACAAATTTGGATCATCTCCGGGTGTTAAATAA 1302 0.4639 MKLAIRIASTQPRASSSSISQPNNPTFPSCESNANSQFNKSLLSWNRLKPPSTKCNFPKLRQKWKQYQGINHWEGLLDPLDDDLRWEILRYGHFVDATYSSFDFDPSSLTYATCLYLKRSLLGKCGLGNYGYRLTRYLHVTCGIHVPAWINKIFKQACIRSSWIGYVAICDNKKEITRLGRRDIVIAFRGTATCLEWLENLRATLTHLPGHVVGGDDGGVGPMVQKGFLSLYTSKTTTRASLQEMVREEIGRVIQRYTNEPLSLTLTGHSLGAALAILSAYDITATFKNAPMVTVISFGGPRVGNESFRKKLEENGIRILRIVNSDDVVTRVPGLVVNLDDVASNEDAHVGIWSRWLHKYVEDMQLVYADIGQELRLSSKEFPNLNKGDVAMCHDLKTYLHLVKNFVSSSCPCKHKKSTPLISHKFGSSPGVK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01933 433 MobiDBLite consensus disorder prediction 9 28 - -
Pumo7g01933 433 SUPERFAMILY alpha/beta-Hydrolases 129 379 IPR029058 -
Pumo7g01933 433 Pfam Lipase (class 3) 185 335 IPR002921 GO:0006629
Pumo7g01933 433 Gene3D alpha/beta hydrolase 63 425 IPR029058 -
Pumo7g01933 433 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 41 416 - -
Pumo7g01933 433 MobiDBLite consensus disorder prediction 1 28 - -
Pumo7g01933 433 CDD Lipase_3 148 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01933 Pumo-Chr7 51353479 51354864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01933 16 415 Acyl Lipid Metabolism Gene Families AT2G44810 56.079 4.98e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01933 K16818 - gmx:106798329 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01933 7 51353479 51354864 Pumo7g01933 7 51353479 51354864 ECH
Pumo7g01933 7 51353479 51354864 Pumo5g00071 5 2876664 2877840 PCT