Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01736 ATGTGCACTGGTGCTGAATCTCGAGGAGATATAAATGGTGAGGCTGTGATTTCAAAGGTGGGAGGAGACTATCATGAGGATAGAATGAGAACCATAGAAGGTGGAGAAGATCAAAGAGCTTGCAACTGTGGCACATTTGTTCAAGGCCTTCTTCAATGCATACATAATCATCTCACTGCACTTAATCTCCCAACCCTTTCTGCTTCTGAGTTGAAAGAAGAATTGCAATCTCTTGCAAAGGTTGCATGTCCCATAATAATGACAAGCCTAATGATGTACTCTCGATCTGCTGTGTCCATGTTGTTTTTGGGTCGGCAAGGGAAAGTAGAGCTAGCAGGAGGCTCACTAGCACTTGGATTTGCCAACATCACTGCAAACTCAGTCCTCAAAGGCCTCACTATGGGAATGGACCCAATTTGTTGCCAAGCATATGGAGCCAAGAGATGGTCAGTTCTCAACCAAACCTTTTTCAGAACTCTATGTCTCCTCCTACTTGTTGCCATCCCCATTTCAATTTTGTGGCTAAACATGGAACCCATCCTTCAAATGCTAGGTCAAGACCCTGAAGTCACAAAAGTTGCCCAAGTTTACATGGTCTTCTCTATTCCAGAGTTGCTAGCTCAGGCTCATCTTAATCCACTGAGGTCCTTCTTAAGAACCCAAGGCTTAACCACCCCAGTTACTATAGCTGCTTCTTGTGCAGCACTCTTGCACCTTCCTATCAACTATTTCTTGGCCACATACTTGAATTTGGGGGTAAAGGGTATTGCACTAGCCACTGGTTTGAACTCAATAAACATGACTCTAGGCTTGGTGCTTTATATTTTGTTCTCAAAGAAACCACTAAAGCCTTGGCAAGGTGCTACACTCCTCTCAGCCTTTCATGGATGGAGACCACTGCTGAGTTTGGCATTGCCTAGTTGCATCTCTGTGTGCTTGGAGTGGTGGTGGTATGAGATAATGCTCTTTCTGTGTGGCTTGTTAAGCAATCCACAAGCCACAGTTGCTACCATGGGGATCCTCATTCAAACACTTGGGTTCTTGTATGTGTTCCCATTTTCACTAAGCATAGCCTTGACAACAAGAATTGGCCACTCATTAGGTGCAGGGCAAGCATCCAAGGCCCAAAGTACAGCCATAATTGGGTTTTTCACAGCATTTACCTTGGGGCTCACTGCCTTCATTTTGTTGTTTTTTGTGAGGAAATCATGGGGGAAACTTTTCACTGATGAGACTCAAATCATTGAGCTGGTCACAACTATACTTCCCATTCTTGGGTTGTGTGAGGTGACCGTCGATGGCGCCGTTGGAATCCAGAAGGATCTTCTCCGCCGTCAACACCAGTTAGAAATTCGATCGCTCCATGATGACTGTCGTGGCGCCGTCTCGGACGGGCTACAGAGTGTCGCGATAGTGCGATCCTCCTCGAATCCGAGCCATCCAAAGCCGCGAGCAATCGCCGTGCAACCATATTAA 1476 0.46 MCTGAESRGDINGEAVISKVGGDYHEDRMRTIEGGEDQRACNCGTFVQGLLQCIHNHLTALNLPTLSASELKEELQSLAKVACPIIMTSLMMYSRSAVSMLFLGRQGKVELAGGSLALGFANITANSVLKGLTMGMDPICCQAYGAKRWSVLNQTFFRTLCLLLLVAIPISILWLNMEPILQMLGQDPEVTKVAQVYMVFSIPELLAQAHLNPLRSFLRTQGLTTPVTIAASCAALLHLPINYFLATYLNLGVKGIALATGLNSINMTLGLVLYILFSKKPLKPWQGATLLSAFHGWRPLLSLALPSCISVCLEWWWYEIMLFLCGLLSNPQATVATMGILIQTLGFLYVFPFSLSIALTTRIGHSLGAGQASKAQSTAIIGFFTAFTLGLTAFILLFFVRKSWGKLFTDETQIIELVTTILPILGLCEVTVDGAVGIQKDLLRRQHQLEIRSLHDDCRGAVSDGLQSVAIVRSSSNPSHPKPRAIAVQPY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01736 491 CDD MATE_eukaryotic 74 430 IPR045069 GO:0042910|GO:1990961
Pumo7g01736 491 NCBIfam MATE family efflux transporter 84 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo7g01736 491 Pfam MatE 84 244 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo7g01736 491 Pfam MatE 306 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo7g01736 491 PANTHER MULTIDRUG RESISTANCE PROTEIN 70 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01736 Pumo-Chr7 45779685 45791517 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01736 K03327 - gmx:106798137 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01059 5 23397578 23402568 Pumo7g01736 7 45779685 45791517 PCT