Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01059 ATGTGCACTGGTGCTGAATCTCGAGGAATTGTACATGGTGACCCCGTGAATAAAAATATCAATGGAACGAGAAACATAGAAGGTGGTGAAGGAGAAAGAAACAGTGGTTGTGGCTGCAGATTCGTTCAAGGCCTTCATCAACACTTACATCAACTTCTCAAAGCACTTTTCCCTACCCTTTCTCTCTCTGAGGTGAAAGAAGAGTTGAAATCACTAGCGAACATTGCATGTCCAATAATGATGACCAACGTGCTTCTGTACTCTCGATCAGCCATTTCCATGCTGTTCTTGGGTCGCCAAGGGAAAGTGGAGCTAGCTGGAGGATCACTTGCAATAGGGTTTGCCAACATCACTGCCAATTCATTCCTCAAGGGCCTCACCATGGGAATGGACCCAATTTGTTGCCAAGCATATGGTGCAAAAAGATGGTCAGTTCTAAGCCAAACTTTTTGCAAAACCTTGTGTCTCCTCCTCCTTGTTGCCATTCCCATTTCACTCCTGTGGCTAAACATGGCACCCCTCCTTCAGTGGCTAGGCCAAGACCCTGAAGTCACAAAGGTTGCACAAGTTTACATGGTTTTCTCTATCCCAGAATTGCTTGCCCAAGTTCATCTCAATCCATTAAGGTCTTTTTTGAGAACACAAGGGTTAACAGCACCATTAACTGTGGCTGCTTCTTTTGCTGCCATCTTACACCTTCCAATAAATTACTTCTTGGCTACATATTTGGAGTTAGGTGTAAAAGGCATTGCATTAGCCACAGGTTTGAACTCCATAAACATGATCCTAGGCTTGGTGCTTTACCTTCTTGTTTCAAAGAAACCTCTAAAACCTTGGGAAGGGGCTACTATTCTCTCTTCCTTTCATGATTGGAGACCTTTGCTAAGCCTAGCATTGCCTAGTTGCATCTCAGTGTGCTTGGAGTGGTGGTGCTATGAGATAATGCTCTTCCTATGTGGCTTGCTGAGTAATCCACAAACCACAGTTGCCACCATGGGTGTCCTAATTCAAACAACAGGGTTCCTATATGTGTTCCCATTTTCATTGAGTGCTGCATTGACAACACAAATTGGTCACTCCCTAGGTGCAGGGCAACCCTCACGTGCACAAAGCACAGCCACAATTGGACTTTTCATTGCATTTGCATTAGGGGTCTTGGCCTTCATTTTCTTGATGCTTGTGAGGAATGTGTGGGGGAAACTGTTCACAAGTGAGACACAAATTGTTGATATGGTCACAACCATACTTCCAATTTTAGGGCTGTGTGAGATTGGAAATTGGCCTCAAACTGCTGCATGTGGGGTCTTATCTGGGACTGCACGGCCTTATGTGGGTGCTAGAATAAACTTGTGTGCATTTTACTTGATTGGATTGCCGGTTGCAGTTTTTGCTGCTTTCATGCACAGATACCAATTGAGGGGTTTGTGGTTTGGAATGTTGGCAGCGCAAATTTCATGTTTTTGTATGATGGTTTACACATTGATTCAAACGGATTGGGGGCACCAAAGTAAGAGAGCTGGGCAATTAGCTCAAACTGCAGATGAGGAAAATGTAAATGATGATGATGAGGAAAGTGTGCTCCTTGATTCTGATTTATGA 1599 0.4409 MCTGAESRGIVHGDPVNKNINGTRNIEGGEGERNSGCGCRFVQGLHQHLHQLLKALFPTLSLSEVKEELKSLANIACPIMMTNVLLYSRSAISMLFLGRQGKVELAGGSLAIGFANITANSFLKGLTMGMDPICCQAYGAKRWSVLSQTFCKTLCLLLLVAIPISLLWLNMAPLLQWLGQDPEVTKVAQVYMVFSIPELLAQVHLNPLRSFLRTQGLTAPLTVAASFAAILHLPINYFLATYLELGVKGIALATGLNSINMILGLVLYLLVSKKPLKPWEGATILSSFHDWRPLLSLALPSCISVCLEWWCYEIMLFLCGLLSNPQTTVATMGVLIQTTGFLYVFPFSLSAALTTQIGHSLGAGQPSRAQSTATIGLFIAFALGVLAFIFLMLVRNVWGKLFTSETQIVDMVTTILPILGLCEIGNWPQTAACGVLSGTARPYVGARINLCAFYLIGLPVAVFAAFMHRYQLRGLWFGMLAAQISCFCMMVYTLIQTDWGHQSKRAGQLAQTADEENVNDDDEESVLLDSDL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01059 532 PANTHER MULTIDRUG RESISTANCE PROTEIN 64 499 - -
Pumo5g01059 532 MobiDBLite consensus disorder prediction 510 532 - -
Pumo5g01059 532 NCBIfam MATE family efflux transporter 78 476 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g01059 532 MobiDBLite consensus disorder prediction 515 532 - -
Pumo5g01059 532 CDD MATE_eukaryotic 68 505 IPR045069 GO:0042910|GO:1990961
Pumo5g01059 532 Pfam MatE 78 238 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g01059 532 Pfam MatE 300 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01059 Pumo-Chr5 23397578 23402568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01059 K03327 - gmx:100816717 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01059 5 23397578 23402568 Pumo7g01736 7 45779685 45791517 PCT