Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01710 ATGGCTAGCCTCAAGGTTGCATGTGTGGTTGCTGTGATGTGCATGGTTGTAGTAGTGAGTGCTGCACCCATGGCACAGGCTGTGATCACGTGCGACCAGGTCGCCAGCTTCGTCGGTCCGTGCCTCAGTTATCTTCGGGGCAGCGAAGCACCGTCGGCGGCCTGCTGCACCGGGGTGAGTTTCCTCAACTATGGGGCCAGGACCACCGCGGACCATCATGTCGTGTGCAGTTGCCTGAAAAGCCTTGTCAATAGTATGGGTGGGAGATTGAATGCCGATAACGCAGCCTCTCTCCCAGACAAATGTGGCGTCAACATCCCCTACAAGATCAGCACCTCCAACAACTGCGCCGCGTATCATCAGCATCAAGTTCTGAAGGATGGAGCTGGTAAGGAAGAAACGGCAGGGCAATTTTTCAGTCGCAGGATACTATATATGATAGTAGAGCTGTAG 453 0.543 MASLKVACVVAVMCMVVVVSAAPMAQAVITCDQVASFVGPCLSYLRGSEAPSAACCTGVSFLNYGARTTADHHVVCSCLKSLVNSMGGRLNADNAASLPDKCGVNIPYKISTSNNCAAYHQHQVLKDGAGKEETAGQFFSRRILYMIVEL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01710 150 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 5 117 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 Gene3D - 28 119 IPR036312 -
Pumo7g01710 150 PRINTS Plant phospholipid transfer protein signature 89 106 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 PRINTS Plant phospholipid transfer protein signature 71 86 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 PRINTS Plant phospholipid transfer protein signature 30 46 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 PRINTS Plant phospholipid transfer protein signature 107 118 IPR000528 GO:0006869|GO:0008289
Pumo7g01710 150 CDD nsLTP1 29 116 - -
Pumo7g01710 150 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 118 IPR036312 -
Pumo7g01710 150 SMART aai_6 31 116 IPR016140 -
Pumo7g01710 150 Pfam Probable lipid transfer 12 109 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01710 Pumo-Chr7 45154017 45155705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01710 4 116 Acyl Lipid Metabolism Gene Families AT2G38540 44.348 1.40e-23 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01710 - - gmx:100815185 138.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01031 5 23072239 23088628 Pumo7g01710 7 45154017 45155705 PCT