Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01483 ATGTTTGTTCATCGGCTTCTTAAACATGTCAAGTTATCTGTCTTCTCTATAATCACTTTCTCTGCTATAATTTTTCTTTTCTATGCAGATAGTGTTATCTACCATGATTCCTTACACTCAGCAGCTAATACAGAAGCTCCAGAGAAGTTGGAAGTTCACAATCACAGAACAAAAGAAGGAATAAGGTCAACACTTGTTCATGTACCTTTACGTTCCATTCAAGAGAAGGATGAAGCTGATGGTAGAATTCAGAAGGCTCTAGTTGCCCCAGTCAATGTCACAGAAGAAGAAAGAATAGCATGGTTTCGAGAACAGCCGCACAACTTCAAGATCCTCAAGTCAAACAACTTGACCCGGCAATTTCATGCTCGAGTTTTGGGATTTTTCGGCCGCGAATGCGAGGCTCAGTTTTTCATGACTTGGATTTCCCCTGCCAGTTTATTTGGAGGGAGAGAATTGCTGTCTGTGGAAAGCATTTTCAAGAACCATCCTAAGGCATGTCTGATAATTCTATCAAGAACTTTGGACAGCAGATACGGCTACAGGATCCTGAAACCACTGCTTGATCGCGGGTTCAAAGTGCAGGCAATGGCCCCAGACTTGCCATTTTTGGTCAAGAGGACTCCAGCTGAAGCTTGGTTTCGTGAGCTAAGGAAGGGTAGAAAGGACCCTGGTGAGATTCCTTTGTCTCAGAATCTATCTAATCTGATAAGACTTGCAGTTCTGTACAAATATGGTGGTATCTACATAGATACAGATTTTATAGTTCTAAAACCCTTAACAGGGTTAAGGAATTCTATTGGAGCACAGAGCATGAATTCGGGTAAGAACTGGACCAGATTAAATAATGCAGTTCTGATTTTTGATATTGGACATCCACTTCTGCATAGATTCATCAACGAATTTGCATTGACTTTTGATGGAAACAAATGGGGGCATAATGGTCCCTACCTAGTTTCCAGAGTGATTAAGAGGCTGGGGAGAAGACATGATTTCAACTTTACAATCTTGCCGCCTATGGCCTTTTATCCAGTGGACTGGAACAAGATAAATGGTCTCTTTATGAAGCCGAAAACTCGGGAAGAATCAAGATGGGTAGAAGCCAAACTGCTTCAGCTCAGTGGAAAGACTTATGGGATTCATCTATGGAATAAACATAGTAGCAGATTGACAATTGAAGAAGAAAGTATCATAGGAAGACTTGTATCAGATTATTGTGTCATTTGCAACAATAGGTATAGTTCTTAG 1248 0.4079 MFVHRLLKHVKLSVFSIITFSAIIFLFYADSVIYHDSLHSAANTEAPEKLEVHNHRTKEGIRSTLVHVPLRSIQEKDEADGRIQKALVAPVNVTEEERIAWFREQPHNFKILKSNNLTRQFHARVLGFFGRECEAQFFMTWISPASLFGGRELLSVESIFKNHPKACLIILSRTLDSRYGYRILKPLLDRGFKVQAMAPDLPFLVKRTPAEAWFRELRKGRKDPGEIPLSQNLSNLIRLAVLYKYGGIYIDTDFIVLKPLTGLRNSIGAQSMNSGKNWTRLNNAVLIFDIGHPLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLGRRHDFNFTILPPMAFYPVDWNKINGLFMKPKTREESRWVEAKLLQLSGKTYGIHLWNKHSSRLTIEEESIIGRLVSDYCVICNNRYSS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01483 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 10 414 IPR044789 -
Pumo7g01483 415 Pfam Alpha 1,4-glycosyltransferase conserved region 288 411 IPR007652 -
Pumo7g01483 415 Pfam Glycosyltransferase sugar-binding region containing DXD motif 151 271 IPR007577 -
Pumo7g01483 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 111 412 IPR029044 -
Pumo7g01483 415 Gene3D - 176 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01483 Pumo-Chr7 37544198 37545622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo7g01483 11 411 Glycosyltransferase AT2G38150 48.403 1.31e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01483 K01988 - gmx:100781975 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01183 5 26595031 26595564 Pumo7g01483 7 37544198 37545622 PCT