Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01183 ATGAGACTTGCAGTTTTGTACAAATATGGTGGTGTGTACCTAGACACAGATTTTATAGTCTTGAAACCTTTAACTGGGTTGAGGAATTGTATTGGGGCACAAAGCATGGATTTTGGGAATAAGCACTGGACTAGACTAAACAATGCAGTTCTGATATTTGACATGAATCATCCACTTCTTCTCAGATTCATTGATGAATTTGTGTTTACTTTTGATGGGAACAGATGGGGGCATAATGGTCCCTACCTGGTTTCCAGAGTGGTTGAGAGACTGGGGGAAAGGCCAGGTTTCAACTTTACAATCTTGCCTCCTATGGCCTTTTATCCAACAGATTGGAAAAAGATTGGTGGTCTCTTTAGGAAGCCAACAACTAGAAGTGAATCAAAATGGGTTGAAGCCAAACTGCTTCAGCTTAGTGGTGAGGCTTATGGGGTGCATCTATGGAACAAAGAAAGTAGGAGATTGAAGATTGAGGAAGGAAGTGTCATAGCAAGACTTGTATCTTATCATTGTGTCATTTGCAAGTCTCTGTAG 534 0.4082 MRLAVLYKYGGVYLDTDFIVLKPLTGLRNCIGAQSMDFGNKHWTRLNNAVLIFDMNHPLLLRFIDEFVFTFDGNRWGHNGPYLVSRVVERLGERPGFNFTILPPMAFYPTDWKKIGGLFRKPTTRSESKWVEAKLLQLSGEAYGVHLWNKESRRLKIEEGSVIARLVSYHCVICKSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01183 177 Gene3D - 1 99 - -
Pumo5g01183 177 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 1 176 IPR044789 -
Pumo5g01183 177 Pfam Glycosyltransferase sugar-binding region containing DXD motif 1 35 IPR007577 -
Pumo5g01183 177 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 174 IPR029044 -
Pumo5g01183 177 Pfam Alpha 1,4-glycosyltransferase conserved region 53 175 IPR007652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01183 Pumo-Chr5 26595031 26595564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01183 2 177 Glycosyltransferase AT2G38150 59.887 6.16e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01183 K01988 - gmx:100812965 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01183 5 26595031 26595564 Pumo5g01183 5 26595031 26595564 ECH
Pumo5g01183 5 26595031 26595564 Pumo7g01483 7 37544198 37545622 PCT