Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo7g01242 ATGGAAATGAAGAATGAGGATCAGATCACACAACAGGCTCAGAGATCAAAATATGATTGCCTCCTATTTGATTTAGATGATACTTTGTATCCTCTCAATTCTGGTATGGCAAATGCAGTTGACCAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATAGAACCAAGTAAAACTGATGAAATGATCAACCTCCTTTACAGTAACTATGGAACTACTATTGCTGGTCTAAGGGCAATTGGGTATGACATAGACCATGAAGATTATTACAGTTTTGTTCATGGGAAATTACCTTATGAGAACTTAAAGCCAGACCCAGTTCTGAGGAATCTGCTGCTGAGTCTGCCCTATAGGAAGCTTATCTTCACAAACTCAGACAAAGTCCATACGATTAAGACACTTGAAAGACTTGGGTTGGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCTATCCACAAGAGCACTGTTTCTGATTATGGAGATGACATAGAGCTTGAGGGTTCAAGGAGCACAAATCCAACACCTGAAAATGGTGTAAAAGGCTCTGAAATCTTTGACATAATAGAGCACTTTGCTCAACCTGATCCCAGTGCAGTCCTGCCAGAGACACCAATTATCTGCAAACCATCAGAACATGCCATTGAATTGGCCCTCAAGATGGCCAACCTTAACCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATACAAGCTGGAAAACGAGTGGGTCTTCACACTGTGCTGGTTGGTAGATCCCACAAAGTTAAAGGTGCTGATTATGCCATGGAAAGCATTCACAATCTTAAGGAGGCAGTGCCTGAACTATGGGAAGCTGACATAAAAGAACAAGTTGCATGCCCTGGGACTGAGAAGCTTGCAGTGGAGACACCAGTGATGGCTTGA 921 0.4191 MEMKNEDQITQQAQRSKYDCLLFDLDDTLYPLNSGMANAVDQNIKDYMVEKLGIEPSKTDEMINLLYSNYGTTIAGLRAIGYDIDHEDYYSFVHGKLPYENLKPDPVLRNLLLSLPYRKLIFTNSDKVHTIKTLERLGLEDCFEGIICFETLNPIHKSTVSDYGDDIELEGSRSTNPTPENGVKGSEIFDIIEHFAQPDPSAVLPETPIICKPSEHAIELALKMANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGRSHKVKGADYAMESIHNLKEAVPELWEADIKEQVACPGTEKLAVETPVMA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo7g01242 306 Pfam Haloacid dehalogenase-like hydrolase 21 152 IPR041492 -
Pumo7g01242 306 Pfam Haloacid dehalogenase-like hydrolase 212 255 IPR041492 -
Pumo7g01242 306 SUPERFAMILY HAD-like 17 282 IPR036412 -
Pumo7g01242 306 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 284 - -
Pumo7g01242 306 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 6 304 - -
Pumo7g01242 306 SFLD C1.5.3: 5'-Nucleotidase Like 12 284 IPR010237 -
Pumo7g01242 306 NCBIfam HAD-IA family hydrolase 209 255 IPR006439 -
Pumo7g01242 306 Gene3D - 82 282 IPR023214 -
Pumo7g01242 306 CDD HAD_5NT 20 257 IPR010237 -
Pumo7g01242 306 NCBIfam pyrimidine 5'-nucleotidase 19 255 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo7g01242 Pumo-Chr7 29439405 29442319 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo7g01242 K07025 - gmx:106794111 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01477 5 38652809 38656123 Pumo7g01242 7 29439405 29442319 PCT