Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01477 ATGGAGTACGAGGACCGCTTCAGACAGAACCAGAGACCAAAATATGATTGCCTTCTCTTTGATTTAGATGATACTTTGTATCCACTAAGCACTGGTCTTGCAAAAGCATGTGGCCAAAATATTAAAGACTATATGGTGGAAAAGCTTGGCATAGAGAAAAGCAAAATTGATGACTTGTCCAACCTCCTCTACAAGAACTATGGAACAACTATGGCTGGTTTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCACAGTTATGTTCATGGGAGATTACCTTATGAGAACTTGAAACCAGACCCAGTTCTGAGGAACCTCTTGCTGAGCCTGCCCTATAGGAAACTGATCTTCACAAACTCAGACGAGGTCCATGCAGTTAAGGCACTTAGCAGGCTTGGATTAGAAGACTGCTTTAAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAAAGCACTGTCTCTGATGATGAAGATGACATTGAGTTTGTGGGGGATTCAGGCACAACAACCAATCCAACCACAAAAAAAGATGCTAGTAGCTTTCAAATCTTTGACATCATTGGCCATTTTGCTCAACCCAATAATCCCAACACAGTTCTGCCAAAGACACCAATTATTTGCAAACCATCAGAAAATGCAATTGAGTTGGCCCTCAAGATAGCCAACCTCAACCCACAAAGAACTTTGTTCTTTGAGGATAGTGTCCGCAACATACAAGCTGGAAAACGTGTGGGTCTTCACACTGTGCTGGTTGGAAAATCTCAGAGAATTAAAGGAGCAGATTATGCATTAGAAAGCATCCACAACCTTAGGGAGGCAGTGCCAGATCTATGGGAAGATGACATAAAATCAGAAGTTACTTATCCTGGCAAGCTTGCTGTGGAGACGTCTGTGACTGCTTAG 915 0.4197 MEYEDRFRQNQRPKYDCLLFDLDDTLYPLSTGLAKACGQNIKDYMVEKLGIEKSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSYVHGRLPYENLKPDPVLRNLLLSLPYRKLIFTNSDEVHAVKALSRLGLEDCFKGIICFETLNPIHKSTVSDDEDDIEFVGDSGTTTNPTTKKDASSFQIFDIIGHFAQPNNPNTVLPKTPIICKPSENAIELALKIANLNPQRTLFFEDSVRNIQAGKRVGLHTVLVGKSQRIKGADYALESIHNLREAVPDLWEDDIKSEVTYPGKLAVETSVTA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01477 304 NCBIfam pyrimidine 5'-nucleotidase 16 255 IPR010237 -
Pumo5g01477 304 NCBIfam HAD-IA family hydrolase 210 255 IPR006439 -
Pumo5g01477 304 Gene3D - 104 289 IPR023214 -
Pumo5g01477 304 SUPERFAMILY HAD-like 14 283 IPR036412 -
Pumo5g01477 304 SFLD C1.5.3: 5'-Nucleotidase Like 10 283 IPR010237 -
Pumo5g01477 304 Gene3D - 8 99 - -
Pumo5g01477 304 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 4 303 - -
Pumo5g01477 304 Pfam Haloacid dehalogenase-like hydrolase 212 255 IPR041492 -
Pumo5g01477 304 SFLD Haloacid Dehalogenase 10 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01477 Pumo-Chr5 38652809 38656123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01477 K07025 - gmx:100795391 569.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01477 5 38652809 38656123 Pumo5g01477 5 38652809 38656123 ECH
Pumo5g01477 5 38652809 38656123 Pumo7g01242 7 29439405 29442319 PCT